RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ANKRD55Q3KP44 614 aa12.87□□□□□ -0.35
TSKU-202ENST00000525167 FAM106AQ4KMX7 169 aa12.87□□□□□ -0.35
TSKU-202ENST00000525167 ZNF57Q68EA5 555 aaPredicted RBP12.87□□□□□ -0.35
TSKU-202ENST00000525167 OR4A47Q6IF82 309 aa12.87□□□□□ -0.35
TSKU-202ENST00000525167 PLECQ15149 4684 aaKnown RBP12.87□□□□□ -0.35
TSKU-202ENST00000525167 HMX3A6NHT5 357 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 HLA-AP01891 365 aaKnown RBP12.86□□□□□ -0.35
TSKU-202ENST00000525167 HIST1H1BP16401 226 aaKnown RBP12.86□□□□□ -0.35
TSKU-202ENST00000525167 RAB3BP20337 219 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 GALP22466 123 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 CRHBPP24387 322 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 PUSL1Q8N0Z8 303 aaKnown RBP12.86□□□□□ -0.35
TSKU-202ENST00000525167 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 FANCD2OSQ96PS1 177 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 FYTTD1Q96QD9 318 aaKnown RBP12.86□□□□□ -0.35
TSKU-202ENST00000525167 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
TSKU-202ENST00000525167 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
TSKU-202ENST00000525167 EDN2P20800 178 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 PSMB6P28072 239 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 AQP4P55087 323 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 RPL30P62888 115 aaKnown RBP12.85□□□□□ -0.35
TSKU-202ENST00000525167 OR2B11Q5JQS5 317 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 HACD4Q5VWC8 232 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 CNIH2Q6PI25 160 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 ATG5Q9H1Y0 275 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 NDUFB11Q9NX14 153 aa12.85□□□□□ -0.35
TSKU-202ENST00000525167 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
TSKU-202ENST00000525167 TRBV7-1A0A0A6YYK4 115 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 SCGNO76038 276 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 NDUFB8O95169 186 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 HRASP01112 189 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 CTRB1P17538 263 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 NFYAP23511 347 aaPredicted RBP12.84□□□□□ -0.35
TSKU-202ENST00000525167 EIF4EBP1Q13541 118 aaPredicted RBP12.84□□□□□ -0.35
TSKU-202ENST00000525167 CDNFQ49AH0 187 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 VKORC1L1Q8N0U8 176 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 TCTEX1D2Q8WW35 142 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 LINC00476Q8WZB0 136 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 AIFM2Q9BRQ8 373 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 MLXQ9UH92 298 aa12.84□□□□□ -0.35
TSKU-202ENST00000525167 TRDV1A0A1B0GX56 115 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 J3QRK9 145 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 MSMO1Q15800 293 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 OR4A5Q8NH83 315 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
TSKU-202ENST00000525167 ELF5Q9UKW6 265 aaPredicted RBP12.83□□□□□ -0.36
TSKU-202ENST00000525167 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 A0A1B0GW64 132 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 E7EUB6 86 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 DEFA4P12838 97 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 AREGP15514 252 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 RPL8P62917 257 aaKnown RBP12.82□□□□□ -0.36
TSKU-202ENST00000525167 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 WFDC3Q8IUB2 231 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 MFSD4AQ8N468 514 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 BLOC1S6Q9UL45 172 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 SPATA2Q9UM82 520 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 TP53TG1Q9Y2A0 90 aa12.82□□□□□ -0.36
TSKU-202ENST00000525167 NUPR2A6NF83 97 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 FGF2P09038 288 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 HLA-GP17693 338 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 ELLP55199 621 aaPredicted RBP12.81□□□□□ -0.36
TSKU-202ENST00000525167 BRWD1-AS2P59051 145 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 SRSF8Q9BRL6 282 aaKnown RBP12.81□□□□□ -0.36
TSKU-202ENST00000525167 MRPL27Q9P0M9 148 aaKnown RBP12.81□□□□□ -0.36
TSKU-202ENST00000525167 ANXA10Q9UJ72 324 aa12.81□□□□□ -0.36
TSKU-202ENST00000525167 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.36
TSKU-202ENST00000525167 SCAF4O95104 1147 aaKnown RBP12.8□□□□□ -0.36
TSKU-202ENST00000525167 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
TSKU-202ENST00000525167 GNG2P59768 71 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 BTNL8Q6UX41 500 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 RBPMS2Q6ZRY4 209 aaKnown RBP12.8□□□□□ -0.36
TSKU-202ENST00000525167 Q6ZWC4 215 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 NR2C2APQ86WQ0 139 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 OR1L6Q8NGR2 347 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 NUDCD2Q8WVJ2 157 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 TAS2R8Q9NYW2 309 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 THYN1Q9P016 225 aa12.8□□□□□ -0.36
TSKU-202ENST00000525167 UFC1Q9Y3C8 167 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms