RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 SNAPC5O75971 98 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 KBTBD11O94819 623 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 CA2P00918 260 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 OPN1MWP04001 364 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 OPN1MW2P0DN77 364 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 OPN1MW3P0DN78 364 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 PI3P19957 117 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 CRIP2P52943 208 aaPredicted RBP13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 UBE2MP61081 183 aaKnown RBP13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 SRPXP78539 464 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 FXYD3Q14802 87 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 AKIRIN2Q53H80 203 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 TEX38Q6PEX7 206 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 PUSL1Q8N0Z8 303 aaKnown RBP13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 OR5AU1Q8NGC0 362 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 ARPC1AQ92747 370 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 CLCC1Q96S66 551 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 SPIN2AQ99865 258 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 SPIN2BQ9BPZ2 258 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 HSPB9Q9BQS6 159 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 NAA60Q9H7X0 242 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 WNK1Q9H4A3 2382 aa13.86□□□□□ -0.19
PACSIN3-202ENST00000524509 CRYM-AS1A6NIL9 109 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 LYRM1O43325 122 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 FBXO24O75426 580 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 S1PR2O95136 353 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 RPL8P62917 257 aaKnown RBP13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 TRIM16LQ309B1 348 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 TMEM128Q5BJH2 165 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 HIST2H2BDQ6DRA6 164 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 GALNT14Q96FL9 552 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 CITED1Q99966 193 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 CACFD1Q9UGQ2 172 aa13.85□□□□□ -0.19
PACSIN3-202ENST00000524509 TRAV41A0A0B4J266 112 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 FCN1O00602 326 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 UPK1BO75841 260 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 KRASP01116 189 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 ELANEP08246 267 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 UCP1P25874 307 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 DEFA1P59665 94 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 DEFA3P59666 94 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 GNB1P62873 340 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 TNXAQ16473 311 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 ZNF585BQ52M93 769 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 THOC7Q6I9Y2 204 aaKnown RBP13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 OR4A47Q6IF82 309 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 SSX9Q7RTT3 188 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 H2BFWTQ7Z2G1 175 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 SLC25A42Q86VD7 318 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 FAM219AQ8IW50 185 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 CENPSQ8N2Z9 138 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 RRNAD1Q96FB5 475 aaKnown RBP13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 TMEM222Q9H0R3 208 aa13.84□□□□□ -0.19
PACSIN3-202ENST00000524509 LINC00854A0A1B0GVQ3 168 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 NDUFB6O95139 128 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 AKR1C4P17516 323 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 TMEM95Q3KNT9 176 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 CXorf66Q5JRM2 361 aaPredicted RBP13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 TMEM65Q6PI78 240 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 MRPL41Q8IXM3 137 aaKnown RBP13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 OR5M8Q8NGP6 311 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 IL22RA2Q969J5 263 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 PHB2Q99623 299 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 COMMD5Q9GZQ3 224 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 ZNF430Q9H8G1 570 aaPredicted RBP13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 ZFP57Q9NU63 452 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 TMEM140Q9NV12 185 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 PRNDQ9UKY0 176 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
PACSIN3-202ENST00000524509 UPK2O00526 184 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 CDS2O95674 445 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 HLA-GP17693 338 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 SLC6A1P30531 599 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 AKR1C2P52895 323 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 RAB25P57735 213 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 FOXE3Q13461 319 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 HSD17B13Q7Z5P4 300 aaPredicted RBP13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 TMED4Q7Z7H5 227 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 ZNF695Q8IW36 515 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 VKORC1L1Q8N0U8 176 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 RNASE11Q8TAA1 199 aaKnown RBP13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 GRPEL2Q8TAA5 225 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 WIPF2Q8TF74 440 aaPredicted RBP13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 TP53RKQ96S44 253 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 SRSF8Q9BRL6 282 aaKnown RBP13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 FOXA2Q9Y261 457 aaPredicted RBP13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 NUBP2Q9Y5Y2 271 aa13.82□□□□□ -0.2
PACSIN3-202ENST00000524509 H3BUA1 57 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 M0QZ24 198 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 IGHG4P01861 327 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 IL6RP08887 468 aaPredicted RBP13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 OR5AC1P0C628 307 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 RPL27AP46776 148 aaKnown RBP13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 ASAH1Q13510 395 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 UNQ5815/PRO19632Q6UWF5 114 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 NDUFA11Q86Y39 141 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms