RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PSG4	Q00888	419 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	MS4A2	Q01362	244 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	IFITM2	Q01629	132 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	RBMY1F	Q15415	496 aa	Known RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	C6orf99	Q4VX62	202 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	COA6	Q5JTJ3	125 aa	Known RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	TSPO2	Q5TGU0	170 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF774	Q6NX45	483 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	IGFL3	Q6UXB1	125 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	H2AFV	Q71UI9	128 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	NEGR1	Q7Z3B1	354 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	DPPA2	Q7Z7J5	298 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	GALNT10	Q86SR1	603 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	NAA40	Q86UY6	237 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	LINC00337	Q8N6G1	96 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC35G3	Q8N808	338 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	OR10A6	Q8NH74	314 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF420	Q8TAQ5	688 aa	Predicted RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	FAM210B	Q96KR6	192 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	CMSS1	Q9BQ75	279 aa	Known RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	AIF1L	Q9BQI0	150 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	SEC22C	Q9BRL7	303 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	CHST5	Q9GZS9	411 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC25A22	Q9H936	323 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	RPS10P5	Q9NQ39	176 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	OR12D3	Q9UGF7	316 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	UFC1	Q9Y3C8	167 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	IGLV7-46	A0A075B6I9	117 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	IGKV1-27	A0A075B6S5	117 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	OR4C46	A6NHA9	309 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	FAM183A	A6NL82	134 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	LINC00587	B1AMM8	73 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356		F8W036	122 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	STK16	O75716	305 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	TNFSF13	O75888	250 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ARL6IP5	O75915	188 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	S1PR2	O95136	353 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	LY6G6D	O95868	133 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	IGHV3-23	P01764	117 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	FABP3	P05413	133 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	CRH	P06850	196 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	GIP	P09681	153 aa	Predicted RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	OR5G3	P0C626	314 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	CD79A	P11912	226 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF708	P17019	499 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	NELFE	P18615	380 aa	Known RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	CXCL3	P19876	107 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	PSMB1	P20618	241 aa	Known RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	HIST1H1T	P22492	207 aa	Predicted RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	TALDO1	P37837	337 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	OR3A4P	P47883	348 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	GZMM	P51124	257 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	SYNJ2BP	P57105	145 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	AP1S1	P61966	158 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	GNG3	P63215	75 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	EMX1	Q04741	257 aa	Predicted RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	APOF	Q13790	326 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ARFRP1	Q13795	201 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	CDK10	Q15131	360 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF684	Q5T5D7	378 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	SMARCD3	Q6STE5	483 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	IGFL2	Q6UWQ7	119 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	C5orf46	Q6UWT4	87 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	CYHR1	Q6ZMK1	362 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	MOB1B	Q7L9L4	216 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	CALHM3	Q86XJ0	350 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	C1orf158	Q8N1D5	194 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	SMIM20	Q8N5G0	67 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	WFDC11	Q8NEX6	87 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	OR10K1	Q8NGX5	313 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	OR10G6	Q8NH81	332 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	MCFD2	Q8NI22	146 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	TNFAIP8L1	Q8WVP5	186 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	GTSF1	Q8WW33	167 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	TMBIM1	Q969X1	311 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	DCUN1D1	Q96GG9	259 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	SMIM8	Q96KF7	97 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	KCNS1	Q96KK3	526 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	SFXN3	Q9BWM7	321 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	MIXL1	Q9H2W2	232 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	PTGES2	Q9H7Z7	377 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	HEXA-AS1	Q9H8Q6	139 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ENY2	Q9NPA8	101 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	OPTC	Q9UBM4	332 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	PSG8	Q9UQ74	426 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ANGPT4	Q9Y264	503 aa		3.09	□□□□□ -1.91
PCM1-223	ENST00000524356	ZAN	Q9Y493	2812 aa		3.09	□□□□□ -1.92
PCM1-223	ENST00000524356	IGHV3OR16-10	A0A075B7F0	116 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	FAM159B	A6NKW6	160 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356		H3BP45	60 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356		M0QZK8	103 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	GALR3	O60755	368 aa	Predicted RBP	3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	YIF1A	O95070	293 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	IGLV1-44	P01699	117 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	PPBP	P02775	128 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	CRYGD	P07320	174 aa		3.08	□□□□□ -1.92
PCM1-223	ENST00000524356	FAM228B	P0C875	321 aa		3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms