RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 VSTM2AQ8TAG5 236 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 GIMAP1Q8WWP7 306 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 S100A16Q96FQ6 103 aaKnown RBP9.43□□□□□ -0.9
VEGFA-223ENST00000523125 SLC5A7Q9GZV3 580 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 DMRT1Q9Y5R6 373 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.42□□□□□ -0.9
VEGFA-223ENST00000523125 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 SULT1C2O00338 296 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 RBFOX2O43251 390 aaKnown RBP eCLIP9.42□□□□□ -0.95e-9■□□□□ 10.6
VEGFA-223ENST00000523125 TNFAIP8O95379 198 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 HRASP01112 189 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 CSN3P07498 182 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 MYOD1P15172 320 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 MAS1LP35410 378 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 KIR2DS2P43631 304 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 MECP2P51608 486 aaKnown RBP9.42□□□□□ -0.9
VEGFA-223ENST00000523125 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 EXOSC2Q13868 293 aaKnown RBP9.42□□□□□ -0.9
VEGFA-223ENST00000523125 DHRS11Q6UWP2 260 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 SPAG16Q8N0X2 631 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 SAMD12Q8N8I0 201 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 RSRP1Q9BUV0 290 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 SLC2A9Q9NRM0 540 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 SIGLEC8Q9NYZ4 499 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
VEGFA-223ENST00000523125 NPIPB5A8MRT5 1133 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 OR2J3O76001 311 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 AREGP15514 252 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 NAT1P18440 290 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 GNRHRP30968 328 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 RPL27AP46776 148 aaKnown RBP9.41□□□□□ -0.9
VEGFA-223ENST00000523125 RFX2P48378 723 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 TAS2R20P59543 309 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 FXYD4P59646 89 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 POU2AF1Q16633 256 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 KLK9Q2XQG4 91 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 ADAMTSL5Q6ZMM2 481 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 SLC25A42Q86VD7 318 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 SLC25A46Q96AG3 418 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 FANCD2OSQ96PS1 177 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
VEGFA-223ENST00000523125 THAP7Q9BT49 309 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-223ENST00000523125 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 KLK9Q9UKQ9 250 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
VEGFA-223ENST00000523125 TRAV3A0A0B4J244 114 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 IZUMO1RA6ND01 250 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 A8MZ25 164 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 EIF4EP06730 217 aaKnown RBP9.4□□□□□ -0.9
VEGFA-223ENST00000523125 CRYGCP07315 174 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 NCS1P62166 190 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
VEGFA-223ENST00000523125 TMEM69Q5SWH9 247 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 LYSMD2Q8IV50 215 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 FUNDC2Q9BWH2 189 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 VCX3AQ9NNX9 186 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 IFT46Q9NQC8 304 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 C19orf73Q9NVV2 129 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 EHFQ9NZC4 300 aa9.4□□□□□ -0.9
VEGFA-223ENST00000523125 PPP5D1E7EU14 171 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 NDUFB8O95169 186 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 HPRT1P00492 218 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 PMP2P02689 132 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 CTRB1P17538 263 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 HLA-GP17693 338 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 PSMB6P28072 239 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 TAS2R31P59538 309 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 OR2B8PP59922 312 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 TATDN3Q17R31 274 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 CTRB2Q6GPI1 263 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 OR51H1Q8NH63 302 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 MOB3AQ96BX8 217 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 KCTD12Q96CX2 325 aaKnown RBP9.39□□□□□ -0.91
VEGFA-223ENST00000523125 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 RCHY1Q96PM5 261 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 AIFM2Q9BRQ8 373 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 PLEKHA2Q9HB19 425 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 FBXL7Q9UJT9 491 aa9.39□□□□□ -0.91
VEGFA-223ENST00000523125 RYR3Q15413 4870 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 H0Y980 276 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 UPK2O00526 184 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 S1PR2O95136 353 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
VEGFA-223ENST00000523125 REG1AP05451 166 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 NQO2P16083 231 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 PRSS3P35030 304 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 HERV-K104P61576 105 aa9.38□□□□□ -0.91
VEGFA-223ENST00000523125 VBP1P61758 197 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms