RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MDFIC2A0A1B0GVS7 189 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 UPK2O00526 184 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 MBPP02686 304 aaPredicted RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 PSMB6P28072 239 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 SRP14P37108 136 aaKnown RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 NKX2-1P43699 371 aaPredicted RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 F2RL1P55085 397 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 RELBQ01201 579 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 RAB32Q13637 225 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 EBI3Q14213 229 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 MMDQ15546 238 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 SSX3Q99909 188 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 BET1LQ9NYM9 111 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 AKAP9Q99996 3911 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 KBTBD11O94819 623 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 IL6RP08887 468 aaPredicted RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 CD99P14209 185 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 DYNLT3P51808 116 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 FGL1Q08830 312 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 LRRC75BQ2VPJ9 315 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 C9orf139Q6ZV77 190 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 QTRT1Q9BXR0 403 aaKnown RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 METTL1Q9UBP6 276 aaKnown RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 LSM5Q9Y4Y9 91 aaKnown RBP17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 CELSR1Q9NYQ6 3014 aa17.11■□□□□ 0.33
R3HCC1-208ENST00000522012 C2CD3Q4AC94 2353 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 LY6G6DO95868 133 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 PLGLAQ15195 96 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 ZFP69Q49AA0 526 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 TEX45Q8NA69 505 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 OR4A5Q8NH83 315 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 MAGT1Q9H0U3 335 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 FBXL15Q9H469 300 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 KIAA1456Q9P272 454 aa17.1■□□□□ 0.33
R3HCC1-208ENST00000522012 TRAV14DV4A0A0A6YYC5 116 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 NCBP2LA6PVI3 153 aaKnown RBP17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 RRHO14718 337 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 NBR2O15453 112 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 ST8SIA3O43173 380 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 MPC2O95563 127 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 HNRNPCP07910 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 Q8N6K4 173 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 TMEM167AQ8TBQ9 72 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 PIFOQ8TCI5 191 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 TMUB1Q9BVT8 246 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 TPSG1Q9NRR2 321 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 PRNDQ9UKY0 176 aa17.09■□□□□ 0.33
R3HCC1-208ENST00000522012 G3V3Q6 166 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 BOLA2-SMG1P6H3BVE0 249 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 K7EPK0 472 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 SPDEFO95238 335 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 C1QBP02746 253 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 CRYGBP07316 175 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 HNF1AP20823 631 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 POLR2GP62487 172 aaKnown RBP eCLIP17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 ID3Q02535 119 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 FAM71E2Q8N5Q1 922 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 NPBQ8NG41 125 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 THAP6Q8TBB0 222 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 ZDHHC16Q969W1 377 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 CLCC1Q96S66 551 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 ZFP57Q9NU63 452 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 SIGLEC9Q9Y336 463 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 POMT1Q9Y6A1 747 aa17.08■□□□□ 0.32
R3HCC1-208ENST00000522012 C15orf61A6NNL5 157 aa17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 H3BUX3 64 aa17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 WRBO00258 174 aa17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 IFNA17P01571 189 aa17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 RLN2P04090 185 aa17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 RPL8P62917 257 aaKnown RBP17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 ZNF430Q9H8G1 570 aaPredicted RBP17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 FOXA2Q9Y261 457 aaPredicted RBP17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 OR51B2Q9Y5P1 312 aa17.07■□□□□ 0.32
R3HCC1-208ENST00000522012 PET100P0DJ07 73 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 MYOD1P15172 320 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 TNFRSF9Q07011 255 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 PJVKQ0ZLH3 352 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 AANATQ16613 207 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 C11orf87Q6NUJ2 197 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 PPP1R14BQ96C90 147 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 RNF126Q9BV68 326 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 PLSCR3Q9NRY6 295 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 TMEM14BQ9NUH8 114 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 FKBP11Q9NYL4 201 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 C1RLQ9NZP8 487 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 HSPB7Q9UBY9 170 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 RCL1Q9Y2P8 373 aaKnown RBP17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 FXYD6-FXYD2A0A087WZ82 144 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 FAM90A26D6RGX4 464 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 H0YIZ8 118 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 SSSCA1O60232 199 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 NDUFA3O95167 84 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 ABCA1O95477 2261 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 OPN1MWP04001 364 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 OPN1MW2P0DN77 364 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 OPN1MW3P0DN78 364 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 FOSL1P15407 271 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 HIVEP1P15822 2718 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 LY6EQ16553 131 aa17.06■□□□□ 0.32
R3HCC1-208ENST00000522012 PRSS8Q16651 343 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms