RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 OSTCQ9NRP0 149 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 DEPPQ9NTK1 212 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 WDR83OSQ9Y284 106 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 KIAA1549Q9HCM3 1950 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 ZG16O60844 167 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 BCL3P20749 454 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 FOXL2P58012 376 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 TMEM95Q3KNT9 176 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 SLC23A3Q6PIS1 610 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 OR2T6Q8NHC8 308 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 WDR54Q9H977 334 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
PABPC1-208ENST00000519004 MTCH1Q9NZJ7 389 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 IL36RNQ9UBH0 155 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 TMEM265A0A087WTH1 108 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 H3BRM9 83 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 SUMO3P55854 103 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-208ENST00000519004 C17orf67Q0P5P2 114 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 C10orf128Q5T292 105 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 LINC00173Q6ZV60 143 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-208ENST00000519004 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 PRDM6Q9NQX0 595 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 OR1A1Q9P1Q5 309 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 VCANP13611 3396 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 SH2D7A6NKC9 451 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-208ENST00000519004 H3BUT2 72 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 WDR74Q6RFH5 385 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-208ENST00000519004 MRPL43Q8N983 215 aaKnown RBP11.3□□□□□ -0.6
PABPC1-208ENST00000519004 OR2K2Q8NGT1 345 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
PABPC1-208ENST00000519004 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 PPOXP50336 477 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 CKS1BP61024 79 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
PABPC1-208ENST00000519004 HSD52Q0P140 79 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 PIGCQ92535 297 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 NAA38Q9BRA0 125 aaKnown RBP11.29□□□□□ -0.6
PABPC1-208ENST00000519004 F2RL2O00254 374 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 P0C879 139 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 HTR1DP28221 377 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 GCHFRP30047 84 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 GNG4P50150 75 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 ZNF776Q68DI1 518 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-208ENST00000519004 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-208ENST00000519004 FAM222BQ8WU58 562 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 CLCF1Q9UBD9 225 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
PABPC1-208ENST00000519004 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 hCG_38984A0A1B0GV85 526 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 TLX3O43711 291 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 CELA2BP08218 269 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 DEFB103AP81534 67 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 PHF7Q9BWX1 381 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 ZNF331Q9NQX6 463 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 TEX48A0A1B0GUV7 120 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 COL8A2P25067 703 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 FGF12P61328 243 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 MEF2CQ06413 473 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 TMEM54Q969K7 222 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-208ENST00000519004 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 MS4A6AQ9H2W1 248 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 RP1P56715 2156 aa11.28□□□□□ -0.6
PABPC1-208ENST00000519004 ISLRO14498 428 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 SYNGR3O43761 229 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 CA3P07451 260 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 RAB31Q13636 194 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 SLC25A53Q5H9E4 307 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 CCDC144NLQ6NUI1 221 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 SHISA6Q6ZSJ9 500 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 OR5A1Q8NGJ0 315 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 SPSB4Q96A44 273 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 PERPQ96FX8 193 aa11.27□□□□□ -0.6
PABPC1-208ENST00000519004 SPAARA0A1B0GVQ0 90 aa11.27□□□□□ -0.61
PABPC1-208ENST00000519004 G6PCP35575 357 aa11.27□□□□□ -0.61
PABPC1-208ENST00000519004 OPRK1P41145 380 aa11.27□□□□□ -0.61
PABPC1-208ENST00000519004 FAM216AQ8WUB2 273 aa11.27□□□□□ -0.61
PABPC1-208ENST00000519004 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
PABPC1-208ENST00000519004 KCNS2Q9ULS6 477 aa11.27□□□□□ -0.61
PABPC1-208ENST00000519004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.26□□□□□ -0.61
PABPC1-208ENST00000519004 TRBV6-6A0A0A6YYG2 114 aa11.26□□□□□ -0.61
PABPC1-208ENST00000519004 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms