RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PACRGLQ8N7B6 248 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 OR2T27Q8NH04 317 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 MRPL32Q9BYC8 188 aaKnown RBP1.42□□□□□ -2.18
SQLE-202ENST00000518604 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 DRC3Q9H069 523 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 VCX3BQ9H321 246 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 MAP1LC3AQ9H492 121 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 USE1Q9NZ43 259 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 AK3Q9UIJ7 227 aa1.42□□□□□ -2.18
SQLE-202ENST00000518604 IGHV1-69-2A0A0G2JMI3 117 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 A8MUN3 132 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 PGLYRP1O75594 196 aaPredicted RBP1.41□□□□□ -2.18
SQLE-202ENST00000518604 TPM3P06753 285 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 ZNF705DP0CH99 300 aaPredicted RBP1.41□□□□□ -2.18
SQLE-202ENST00000518604 ZNF705BP0CI00 300 aaPredicted RBP1.41□□□□□ -2.18
SQLE-202ENST00000518604 ANP32AP39687 249 aaKnown RBP1.41□□□□□ -2.18
SQLE-202ENST00000518604 MAGEA12P43365 314 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 MLLT11Q13015 90 aaPredicted RBP1.41□□□□□ -2.18
SQLE-202ENST00000518604 SAPCD1Q5SSQ6 148 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 DYNAPQ8N1N2 210 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 SLC22A24Q8N4F4 322 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 ZNF565Q8N9K5 539 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 PIGXQ8TBF5 258 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 IMMP2LQ96T52 175 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 CYSTM1Q9H1C7 97 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 GPR84Q9NQS5 396 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 ANAPC10Q9UM13 185 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 PRELID1Q9Y255 219 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 RBM7Q9Y580 266 aaKnown RBP1.41□□□□□ -2.18
SQLE-202ENST00000518604 SCN9AQ15858 1988 aa1.41□□□□□ -2.18
SQLE-202ENST00000518604 WDR90Q96KV7 1748 aa1.4□□□□□ -2.18
SQLE-202ENST00000518604 ADCY9O60503 1353 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 MAP3K5Q99683 1374 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 IGHV1-18A0A0C4DH31 117 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 SLC16A4O15374 487 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
SQLE-202ENST00000518604 LGALS1P09382 135 aaKnown RBP1.4□□□□□ -2.19
SQLE-202ENST00000518604 MAGEA2P43356 314 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 C1orf194Q5T5A4 169 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 OGFRL1Q5TC84 451 aaPredicted RBP1.4□□□□□ -2.19
SQLE-202ENST00000518604 LRRN1Q6UXK5 716 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 ZNF705AQ6ZN79 300 aaPredicted RBP1.4□□□□□ -2.19
SQLE-202ENST00000518604 UMODL1-AS1Q8N2C9 162 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 FGFR1OP2Q9NVK5 253 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 NKIRAS1Q9NYS0 192 aa1.4□□□□□ -2.19
SQLE-202ENST00000518604 OR4C45A6NMZ5 311 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 HMSDA8MTL9 139 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 H7C2G1 150 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 M0QZ92 97 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 CXCR6O00574 342 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 S100A6P06703 90 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 RPL12P30050 165 aaKnown RBP1.39□□□□□ -2.19
SQLE-202ENST00000518604 HAAOP46952 286 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 POLR2GP62487 172 aaKnown RBP eCLIP1.39□□□□□ -2.19
SQLE-202ENST00000518604 ACSM3Q53FZ2 586 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 HIST2H3AQ71DI3 136 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 COMMD7Q86VX2 200 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 OR8J2Q8NGG1 315 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 SGMS2Q8NHU3 365 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 UCK1Q9HA47 277 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 RSL24D1Q9UHA3 163 aaKnown RBP1.39□□□□□ -2.19
SQLE-202ENST00000518604 C3orf18Q9UK00 162 aa1.39□□□□□ -2.19
SQLE-202ENST00000518604 TRAV38-1A0A0B4J264 116 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 LRRN3E7EW58 273 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 MSMBP08118 114 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 UCHL3P15374 230 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 AKR1C3P42330 323 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 BLVRAP53004 296 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 RAB14P61106 215 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 TNFAIP6P98066 277 aaPredicted RBP1.38□□□□□ -2.19
SQLE-202ENST00000518604 COQ5Q5HYK3 327 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 C9orf64Q5T6V5 341 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 CST9LQ9H4G1 147 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 COQ4Q9Y3A0 265 aa1.38□□□□□ -2.19
SQLE-202ENST00000518604 FLT4P35916 1363 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 TMEM269A0A1B0GVZ9 245 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 PLA2G10O15496 165 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 ZNF737O75373 536 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 CIAO1O76071 339 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 DEXIO95424 95 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 REG1AP05451 166 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 CCL5P13501 91 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 GPX2P18283 190 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 CCL1P22362 96 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 HOXA6P31267 233 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 RPL28P46779 137 aaKnown RBP1.37□□□□□ -2.19
SQLE-202ENST00000518604 RPL30P62888 115 aaKnown RBP1.37□□□□□ -2.19
SQLE-202ENST00000518604 CAV1Q03135 178 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 FABP9Q0Z7S8 132 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 RSU1Q15404 277 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 TMEM155Q4W5P6 130 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 TNFAIP8L3Q5GJ75 292 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 PTRHD1Q6GMV3 140 aaKnown RBP1.37□□□□□ -2.19
SQLE-202ENST00000518604 SSX8Q7RTT4 187 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 ZNF550Q7Z398 422 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 TMEM86AQ8N2M4 240 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 RPP25LQ8N5L8 163 aaKnown RBP1.37□□□□□ -2.19
SQLE-202ENST00000518604 TBC1D19Q8N5T2 526 aa1.37□□□□□ -2.19
SQLE-202ENST00000518604 ROPN1LQ96C74 230 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms