RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 CATR1Q13166 79 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 DCTN2Q13561 401 aaKnown RBP8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 KLF5Q13887 457 aaPredicted RBP8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 TNXAQ16473 311 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR2B11Q5JQS5 317 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 C10orf55Q5SWW7 151 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 VKORC1L1Q8N0U8 176 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 SPAG16Q8N0X2 631 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 CD300LFQ8TDQ1 290 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 AP3S1Q92572 193 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 AIFM2Q9BRQ8 373 aa8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 RANGRFQ9HD47 186 aaPredicted RBP8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 FAM212BQ9NTI7 297 aaPredicted RBP8.7□□□□□ -1.02
IGHV3-25-201ENST00000518224 HUWE1Q7Z6Z7 4374 aaKnown RBP8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 SMIM31A0A1B0GVY4 71 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 CGB1A6NKQ9 187 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 FAM223BA6NKX1 122 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 NPIPB5A8MRT5 1133 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 PGLYRP1O75594 196 aaPredicted RBP8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 HPRT1P00492 218 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 IGHV3-11P01762 117 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 FCER2P06734 321 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZP3P21754 424 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 RCVRNP35243 200 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 HRH1P35367 487 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 UCP3P55916 312 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 HERV-K104P61576 105 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZNF45Q02386 682 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR4A47Q6IF82 309 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 MZT2AQ6P582 158 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 FAM223AQ8IWN6 122 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR5H2Q8NGV7 314 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 B9D2Q9BPU9 175 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZNF2Q9BSG1 426 aaPredicted RBP8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 DCUN1D5Q9BTE7 237 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 FXYD6Q9H0Q3 95 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 SLC2A9Q9NRM0 540 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 COMMD9Q9P000 198 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZNF257Q9Y2Q1 563 aa8.69□□□□□ -1.02
IGHV3-25-201ENST00000518224 C13orf42A0A1B0GVH6 325 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 TNFSF12O43508 249 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 ACTL6BO94805 426 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 PMP2P02689 132 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 NQO2P16083 231 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 F2RP25116 425 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 TMBIM6P55061 237 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 FXYD4P59646 89 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 RPL8P62917 257 aaKnown RBP8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 SPCS2Q15005 226 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZNF585BQ52M93 769 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 IL34Q6ZMJ4 242 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 SLC25A42Q86VD7 318 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 TMEM17Q86X19 198 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 NECAP1Q8NC96 275 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR6F1Q8NGZ6 308 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 RAB2BQ8WUD1 216 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 SRSF8Q9BRL6 282 aaKnown RBP8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 MIXL1Q9H2W2 232 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 AKIP1Q9NQ31 210 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 MTFP1Q9UDX5 166 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
IGHV3-25-201ENST00000518224 UPK2O00526 184 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 CTRB1P17538 263 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 HLA-GP17693 338 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 TBPP20226 339 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 PTBP1P26599 531 aaKnown RBP eCLIP8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 HLA-DMAP28067 261 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 RPL27AP46776 148 aaKnown RBP8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 OR2B8PP59922 312 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 RHOGP84095 191 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 FAM209BQ5JX69 171 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 AADACL3Q5VUY0 350 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 CTRB2Q6GPI1 263 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 LHFPL1Q86WI0 220 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 DYNC2LI1Q8TCX1 351 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 C15orf40Q8WUR7 153 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 DGCR14Q96DF8 476 aaKnown RBP8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 FANCD2OSQ96PS1 177 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 ABHD1Q96SE0 405 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 PHB2Q99623 299 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 RSRP1Q9BUV0 290 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZNF355PQ9NSJ1 428 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 COA4Q9NYJ1 87 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 SIGLEC8Q9NYZ4 499 aa8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 PEF1Q9UBV8 284 aaKnown RBP8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 ZNF256Q9Y2P7 627 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-25-201ENST00000518224 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 IGLC7A0M8Q6 106 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 HMX3A6NHT5 357 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 GPR31O00270 319 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 S1PR2O95136 353 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 IGLV1-51P01701 117 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 CD74P04233 296 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 APELAP0DMC3 54 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 PSMB6P28072 239 aa8.66□□□□□ -1.02
IGHV3-25-201ENST00000518224 RPL5P46777 297 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms