RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 PHLDA2Q53GA4 152 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 AADACL3Q5VUY0 350 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 CLVS1Q8IUQ0 354 aaPredicted RBP8.84□□□□□ -0.99
VCAN-212ENST00000515397 MMD2Q8IY49 270 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 PUSL1Q8N0Z8 303 aaKnown RBP8.84□□□□□ -0.99
VCAN-212ENST00000515397 TINAGL1Q9GZM7 467 aaPredicted RBP8.84□□□□□ -0.99
VCAN-212ENST00000515397 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 S4R3C0 116 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 SORL1Q92673 2214 aa8.84□□□□□ -0.99
VCAN-212ENST00000515397 TEX22C9J3V5 150 aa8.83□□□□□ -1
VCAN-212ENST00000515397 CTDSP2O14595 271 aa8.83□□□□□ -1
VCAN-212ENST00000515397 PGLYRP1O75594 196 aaPredicted RBP8.83□□□□□ -1
VCAN-212ENST00000515397 OR2J3O76001 311 aa8.83□□□□□ -1
VCAN-212ENST00000515397 KBTBD11O94819 623 aa8.83□□□□□ -1
VCAN-212ENST00000515397 S1PR2O95136 353 aa8.83□□□□□ -1
VCAN-212ENST00000515397 IGHV3-23P01764 117 aa8.83□□□□□ -1
VCAN-212ENST00000515397 RLN1P04808 185 aa8.83□□□□□ -1
VCAN-212ENST00000515397 OR9G9P0C7N8 305 aa8.83□□□□□ -1
VCAN-212ENST00000515397 AREGP15514 252 aa8.83□□□□□ -1
VCAN-212ENST00000515397 RHOGP84095 191 aa8.83□□□□□ -1
VCAN-212ENST00000515397 OR4A47Q6IF82 309 aa8.83□□□□□ -1
VCAN-212ENST00000515397 MZT2AQ6P582 158 aa8.83□□□□□ -1
VCAN-212ENST00000515397 OR6F1Q8NGZ6 308 aa8.83□□□□□ -1
VCAN-212ENST00000515397 OR52I2Q8NH67 350 aa8.83□□□□□ -1
VCAN-212ENST00000515397 TMEM167AQ8TBQ9 72 aa8.83□□□□□ -1
VCAN-212ENST00000515397 MOB3AQ96BX8 217 aa8.83□□□□□ -1
VCAN-212ENST00000515397 FXYD6Q9H0Q3 95 aa8.83□□□□□ -1
VCAN-212ENST00000515397 MIXL1Q9H2W2 232 aa8.83□□□□□ -1
VCAN-212ENST00000515397 HRASLSQ9HDD0 168 aa8.83□□□□□ -1
VCAN-212ENST00000515397 AKIP1Q9NQ31 210 aa8.83□□□□□ -1
VCAN-212ENST00000515397 EXTL2Q9UBQ6 330 aa8.83□□□□□ -1
VCAN-212ENST00000515397 KLK11Q9UBX7 282 aa8.83□□□□□ -1
VCAN-212ENST00000515397 A0A0G2JLM5 398 aa8.82□□□□□ -1
VCAN-212ENST00000515397 CGB1A6NKQ9 187 aa8.82□□□□□ -1
VCAN-212ENST00000515397 HRASP01112 189 aa8.82□□□□□ -1
VCAN-212ENST00000515397 KIR2DS2P43631 304 aa8.82□□□□□ -1
VCAN-212ENST00000515397 LPAR6P43657 344 aa8.82□□□□□ -1
VCAN-212ENST00000515397 RPL27AP46776 148 aaKnown RBP8.82□□□□□ -1
VCAN-212ENST00000515397 TAS2R46P59540 309 aa8.82□□□□□ -1
VCAN-212ENST00000515397 TSPAN5P62079 268 aa8.82□□□□□ -1
VCAN-212ENST00000515397 TTC9CQ8N5M4 171 aa8.82□□□□□ -1
VCAN-212ENST00000515397 ZBTB34Q8NCN2 500 aa8.82□□□□□ -1
VCAN-212ENST00000515397 TMEM68Q96MH6 324 aa8.82□□□□□ -1
VCAN-212ENST00000515397 ABHD1Q96SE0 405 aa8.82□□□□□ -1
VCAN-212ENST00000515397 SPIN2AQ99865 258 aa8.82□□□□□ -1
VCAN-212ENST00000515397 SPIN2BQ9BPZ2 258 aa8.82□□□□□ -1
VCAN-212ENST00000515397 RANGRFQ9HD47 186 aaPredicted RBP8.82□□□□□ -1
VCAN-212ENST00000515397 NSG2Q9Y328 171 aa8.82□□□□□ -1
VCAN-212ENST00000515397 DPPA5A6NC42 116 aa8.81□□□□□ -1
VCAN-212ENST00000515397 H3BUA1 57 aa8.81□□□□□ -1
VCAN-212ENST00000515397 RGS5O15539 181 aa8.81□□□□□ -1
VCAN-212ENST00000515397 NDUFB8O95169 186 aa8.81□□□□□ -1
VCAN-212ENST00000515397 HPRT1P00492 218 aa8.81□□□□□ -1
VCAN-212ENST00000515397 HLA-AP01891 365 aaKnown RBP8.81□□□□□ -1
VCAN-212ENST00000515397 SPNP16150 400 aa8.81□□□□□ -1
VCAN-212ENST00000515397 HLA-GP17693 338 aa8.81□□□□□ -1
VCAN-212ENST00000515397 SYNJ2BPP57105 145 aa8.81□□□□□ -1
VCAN-212ENST00000515397 RPL8P62917 257 aaKnown RBP8.81□□□□□ -1
VCAN-212ENST00000515397 ATP5G2Q06055 141 aa8.81□□□□□ -1
VCAN-212ENST00000515397 CATR1Q13166 79 aa8.81□□□□□ -1
VCAN-212ENST00000515397 MSMO1Q15800 293 aa8.81□□□□□ -1
VCAN-212ENST00000515397 ZNF585BQ52M93 769 aa8.81□□□□□ -1
VCAN-212ENST00000515397 C11orf87Q6NUJ2 197 aa8.81□□□□□ -1
VCAN-212ENST00000515397 ZNF343Q6P1L6 599 aa8.81□□□□□ -1
VCAN-212ENST00000515397 ACSM6Q6P461 480 aa8.81□□□□□ -1
VCAN-212ENST00000515397 LAX1Q8IWV1 398 aa8.81□□□□□ -1
VCAN-212ENST00000515397 FCAMRQ8WWV6 532 aa8.81□□□□□ -1
VCAN-212ENST00000515397 CMTM3Q96MX0 182 aa8.81□□□□□ -1
VCAN-212ENST00000515397 ASCL2Q99929 193 aa8.81□□□□□ -1
VCAN-212ENST00000515397 RSRP1Q9BUV0 290 aa8.81□□□□□ -1
VCAN-212ENST00000515397 PEF1Q9UBV8 284 aaKnown RBP8.81□□□□□ -1
VCAN-212ENST00000515397 SELENOKQ9Y6D0 94 aa8.81□□□□□ -1
VCAN-212ENST00000515397 GPR31O00270 319 aa8.8□□□□□ -1
VCAN-212ENST00000515397 UPK2O00526 184 aa8.8□□□□□ -1
VCAN-212ENST00000515397 CREBL2O60519 120 aaPredicted RBP8.8□□□□□ -1
VCAN-212ENST00000515397 KRASP01116 189 aa8.8□□□□□ -1
VCAN-212ENST00000515397 CD3DP04234 171 aa8.8□□□□□ -1
VCAN-212ENST00000515397 NQO2P16083 231 aa8.8□□□□□ -1
VCAN-212ENST00000515397 PI3P19957 117 aa8.8□□□□□ -1
VCAN-212ENST00000515397 RCVRNP35243 200 aa8.8□□□□□ -1
VCAN-212ENST00000515397 G6PCP35575 357 aa8.8□□□□□ -1
VCAN-212ENST00000515397 CD69Q07108 199 aa8.8□□□□□ -1
VCAN-212ENST00000515397 EXOSC2Q13868 293 aaKnown RBP8.8□□□□□ -1
VCAN-212ENST00000515397 ZNF429Q86V71 674 aa8.8□□□□□ -1
VCAN-212ENST00000515397 DMBX1Q8NFW5 382 aa8.8□□□□□ -1
VCAN-212ENST00000515397 OR10W1Q8NGF6 305 aa8.8□□□□□ -1
VCAN-212ENST00000515397 OR4D10Q8NGI6 311 aa8.8□□□□□ -1
VCAN-212ENST00000515397 VSTM2AQ8TAG5 236 aa8.8□□□□□ -1
VCAN-212ENST00000515397 AP3S1Q92572 193 aa8.8□□□□□ -1
VCAN-212ENST00000515397 DGCR14Q96DF8 476 aaKnown RBP8.8□□□□□ -1
VCAN-212ENST00000515397 FANCD2OSQ96PS1 177 aa8.8□□□□□ -1
VCAN-212ENST00000515397 SCPEP1Q9HB40 452 aa8.8□□□□□ -1
VCAN-212ENST00000515397 SLC2A9Q9NRM0 540 aa8.8□□□□□ -1
VCAN-212ENST00000515397 TMEM140Q9NV12 185 aa8.8□□□□□ -1
VCAN-212ENST00000515397 FBXL7Q9UJT9 491 aa8.8□□□□□ -1
VCAN-212ENST00000515397 ZNF256Q9Y2P7 627 aaPredicted RBP8.8□□□□□ -1
VCAN-212ENST00000515397 TRBV9A0A0B4J1U6 114 aa8.79□□□□□ -1
VCAN-212ENST00000515397 PPP5D1E7EU14 171 aa8.79□□□□□ -1
VCAN-212ENST00000515397 BMPR1BO00238 502 aa8.79□□□□□ -1
VCAN-212ENST00000515397 RBFOX2O43251 390 aaKnown RBP eCLIP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms