RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SSMEM1Q8WWF3 244 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 MBD3L1Q8WWY6 194 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 DYRK2Q92630 601 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 PINX1Q96BK5 328 aaKnown RBP3.06□□□□□ -1.92
CAST-242ENST00000515063 GPR146Q96CH1 333 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 BSCL2Q96G97 398 aaPredicted RBP3.06□□□□□ -1.92
CAST-242ENST00000515063 CYYR1Q96J86 154 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 P2RX4Q99571 388 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 ATP5SQ99766 215 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 TCEAL7Q9BRU2 100 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 SMIM3Q9BZL3 60 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 ARRDC1-AS1Q9H2J1 176 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 NCOR1P1Q9H4R4 102 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 CDH20Q9HBT6 801 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 HES4Q9HCC6 221 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 KCNJ16Q9NPI9 418 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 SIRT7Q9NRC8 400 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 CCL28Q9NRJ3 127 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 ZNF581Q9P0T4 197 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 RNF115Q9Y4L5 304 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 TIMM9Q9Y5J7 89 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 DNAH14Q0VDD8 3507 aa3.06□□□□□ -1.92
CAST-242ENST00000515063 ESPL1Q14674 2120 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 COL6A3P12111 3177 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 IGKV1D-13A0A0B4J2D9 117 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 A0A1W2PNU3 283 aaPredicted RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 TMEM30CPA0ZSE6 113 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 IGSF23A1L1A6 192 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 C7orf77A4D0Y5 90 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 RBFOX3A6NFN3 312 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 OOEPA6NGQ2 149 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 FAM166BA8MTA8 275 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 C9JQL5 133 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 SLC33A1O00400 549 aaPredicted RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 ITGB1BP1O14713 200 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 PPIHO43447 177 aaKnown RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 SYNGR2O43760 224 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 SMPD2O60906 423 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TNFSF15O95150 251 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 IFNA17P01571 189 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 IGKV3-15P01624 115 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 MBP02144 154 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 SRP19P09132 144 aaKnown RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 IGKV1-13P0DP09 117 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 ZNF44P15621 663 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 CBR1P16152 277 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 COX5AP20674 150 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 KITLGP21583 273 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 CCNOP22674 350 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 CA6P23280 308 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 PPT1P50897 306 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 DYNLT3P51808 116 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 PAX9P55771 341 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 BPIFB3P59826 476 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 UBE2NP61088 152 aaKnown RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 PPP1CBP62140 327 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 HBG1P69891 147 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 HBG2P69892 147 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 SRYQ05066 204 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 PNRC1Q12796 327 aaPredicted RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 CATR1Q13166 79 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 GUSBP1Q15486 140 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 LRRC75BQ2VPJ9 315 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 KIAA1644Q3SXP7 199 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 SOHLH1Q5JUK2 328 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 AKR1C8PQ5T2L2 129 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 OR2T2Q6IF00 324 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 PRR27Q6MZM9 219 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TMEM182Q6ZP80 229 aaPredicted RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 Q6ZT83 130 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 P4HA3Q7Z4N8 544 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 SLC35E3Q7Z769 313 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 MDP1Q86V88 176 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 CBLN2Q8IUK8 224 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TMEM105Q8N8V8 129 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 HSD17B11Q8NBQ5 300 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 OR5C1Q8NGR4 320 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 OR13D1Q8NGV5 346 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 HIST1H2BAQ96A08 127 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 LURAP1Q96LR2 239 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 MRPL37Q9BZE1 423 aaKnown RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 BCL2L14Q9BZR8 327 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 EIF5A2Q9GZV4 153 aaKnown RBP3.05□□□□□ -1.92
CAST-242ENST00000515063 CXXC4Q9H2H0 198 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TMEM231Q9H6L2 316 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TMEM9BQ9NQ34 198 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TMEM242Q9NWH2 141 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 KCNIP1Q9NZI2 227 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TAAR3PQ9P1P4 343 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 CLCF1Q9UBD9 225 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
CAST-242ENST00000515063 TTC28Q96AY4 2481 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 MED13Q9UHV7 2174 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 MED12LQ86YW9 2145 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 UNC80Q8N2C7 3258 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 TRAV17A0A0B4J275 112 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 C5orf52A6NGY3 159 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 ZNF98A6NK75 572 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 HSD17B6O14756 317 aa3.04□□□□□ -1.92
CAST-242ENST00000515063 RAB29O14966 203 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms