RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 CA2P00918 260 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 FABP2P12104 132 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 FADS6Q8N9I5 356 aa11.16□□□□□ -0.62
TCOF1-213ENST00000514442 TRAV9-1A0A075B6T8 112 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 LRRC75BQ2VPJ9 315 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 OR4P4Q8NGL7 312 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 FLYWCH2Q96CP2 140 aaKnown RBP11.15□□□□□ -0.62
TCOF1-213ENST00000514442 DLL3Q9NYJ7 618 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 IGHV3-21A0A0B4J1V1 117 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 NPIPB13A6NJU9 1138 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 SLC25A5P05141 298 aaKnown RBP11.15□□□□□ -0.62
TCOF1-213ENST00000514442 RIPPLY3P57055 190 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 TM2D1Q9BX74 207 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 NRN1Q9NPD7 142 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 PGLYRP1O75594 196 aaPredicted RBP11.15□□□□□ -0.62
TCOF1-213ENST00000514442 NHLRC2Q8NBF2 726 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 IL36BQ9NZH7 164 aa11.15□□□□□ -0.62
TCOF1-213ENST00000514442 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.63
TCOF1-213ENST00000514442 ISLRO14498 428 aa11.15□□□□□ -0.63
TCOF1-213ENST00000514442 MGST3O14880 152 aa11.15□□□□□ -0.63
TCOF1-213ENST00000514442 ASCL5Q7RTU5 278 aa11.15□□□□□ -0.63
TCOF1-213ENST00000514442 C1QL2Q7Z5L3 287 aa11.15□□□□□ -0.63
TCOF1-213ENST00000514442 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 C20orf144Q9BQM9 153 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 F2RL2O00254 374 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 HIST1H1EP10412 219 aaKnown RBP11.14□□□□□ -0.63
TCOF1-213ENST00000514442 PSG5Q15238 335 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 ERASQ7Z444 233 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 RSPO3Q9BXY4 272 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-213ENST00000514442 FAM87AP0C7U9 286 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 CFPP27918 469 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 ZFP36L1Q07352 338 aaKnown RBP11.14□□□□□ -0.63
TCOF1-213ENST00000514442 ASPHD2Q6ICH7 369 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 SSX8Q7RTT4 187 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 OR51G1Q8NGK1 321 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 TECRQ9NZ01 308 aaKnown RBP11.14□□□□□ -0.63
TCOF1-213ENST00000514442 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
TCOF1-213ENST00000514442 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 DEPPQ9NTK1 212 aa11.14□□□□□ -0.63
TCOF1-213ENST00000514442 NUDT3O95989 172 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 SELENOTP62341 195 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 OR4D5Q8NGN0 318 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 LEAP2Q969E1 77 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 MEGF9Q9H1U4 602 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 NDUFS8O00217 210 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 MPV17P39210 176 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 GPR6P46095 362 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-213ENST00000514442 OR4F17Q8NGA8 305 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 ZNF714Q96N38 554 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 PLXNA3P51805 1871 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 KLF7O75840 302 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-213ENST00000514442 EGR1P18146 543 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 UNQ5815/PRO19632Q6UWF5 114 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 ST6GALNAC3Q8NDV1 305 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 AAMDCQ9H7C9 122 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
TCOF1-213ENST00000514442 THADAQ6YHU6 1953 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 MED12Q93074 2177 aa11.13□□□□□ -0.63
TCOF1-213ENST00000514442 MFAP2P55001 183 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 Q6ZT83 130 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 TMEM171Q8WVE6 324 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 PMCHL2Q9BQD1 86 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 SYNGR3O43761 229 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 LINC00869P0C866 280 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 CD1BP29016 333 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 ABHD17AQ96GS6 310 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 GPR179Q6PRD1 2367 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 TSC2P49815 1807 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 LOC102723996A0A087X1L8 192 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 M0QZ24 198 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 WNT9BO14905 357 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 SMPD2O60906 423 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 CD59P13987 128 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 UBE2L3P68036 154 aaKnown RBP11.12□□□□□ -0.63
TCOF1-213ENST00000514442 TRAV30A0A087WSZ9 112 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
TCOF1-213ENST00000514442 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 LINC01560Q8TB33 94 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 LSM10Q969L4 123 aaKnown RBP11.12□□□□□ -0.63
TCOF1-213ENST00000514442 TMEM45BQ96B21 275 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 PKIBQ9C010 78 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
TCOF1-213ENST00000514442 PINLYPA6NC86 204 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms