RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 PIGYQ3MUY2 71 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 RFLNBQ8N5W9 214 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 IL36BQ9NZH7 164 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 C1RLQ9NZP8 487 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 DOCK3Q8IZD9 2030 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 PRSS47A8MTI9 375 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 UMODP07911 640 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 WDR31Q8NA23 367 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 ZBTB34Q8NCN2 500 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 OR6X1Q8NH79 312 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 FAM60AQ9NP50 221 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 PLA2G3Q9NZ20 509 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 MRPS18BQ9Y676 258 aaKnown RBP7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 J3KRW8 73 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 K7ESF4 209 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 PYY3Q5JQD4 70 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 SLC23A3Q6PIS1 610 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 VKORC1L1Q8N0U8 176 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 SOSTQ9BQB4 213 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
LIMCH1-218ENST00000513024 LOC105371242A0A075B767 164 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 A0A1B0GWJ7 208 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 APOHP02749 345 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 PPIAL4GP0DN37 164 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 SOX8P57073 446 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 C10orf128Q5T292 105 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 OR9G4Q8NGQ1 327 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 ZPLD1Q8TCW7 415 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 TRBV7-9A0A0J9YWB2 115 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 HOGA1Q86XE5 327 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 HEXA-AS1Q9H8Q6 139 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 MRPS18AQ9NVS2 196 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 PGPA6NDG6 321 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 C17orf51A8MQB3 221 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 HRKO00198 91 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GFRA1P56159 465 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 DLX6P56179 175 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 HSPE1P61604 102 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 CFHR1Q03591 330 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 OR52M1Q8NGK5 317 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 VSTM2LQ96N03 204 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 MS4A6AQ9H2W1 248 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 PLXNA1Q9UIW2 1896 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 CKAP5Q14008 2032 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 IGHV1-69-2A0A0G2JMI3 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE12JA6NER3 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 HYPMO75409 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE7O76087 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 AMBPP02760 352 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE12FP0CL80 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE12GP0CL81 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE12IP0CL82 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 PSG2P11465 335 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GPR6P46095 362 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE4Q13068 117 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
LIMCH1-218ENST00000513024 SBF1O95248 1867 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 BRCA1P38398 1863 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 CENPVL1A0A0U1RR11 272 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 FAM157AC9JC47 383 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 SRP19P09132 144 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 CRYBB3P26998 211 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 ZNF83P51522 516 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 SELENOTP62341 195 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 MRPS11P82912 194 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 LAMTOR1Q6IAA8 161 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 SEMA5BQ9P283 1151 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 KLHDC2Q9Y2U9 406 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 SCN3AQ9NY46 2000 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 F2RL2O00254 374 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 CD160O95971 181 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 ATP5J2P56134 94 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 RPS11P62280 158 aaKnown RBP eCLIP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 ZXDCQ2QGD7 858 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 UNQ6494/PRO21346Q6UXR6 183 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 NAA38Q9BRA0 125 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 GPR132Q9UNW8 380 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 CENPFP49454 3210 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 PRR19A6NJB7 356 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 CDIPTO14735 213 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 CTGFP29279 349 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 FOXL2P58012 376 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE5Q13069 117 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 GAGE6Q13070 117 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 ZIC1Q15915 447 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 POU2AF1Q16633 256 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 LAIR2Q6ISS4 152 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 SCNM1Q9BWG6 230 aa7.5□□□□□ -1.21
LIMCH1-218ENST00000513024 SLC25A15Q9Y619 301 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms