RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RPL30P62888 115 aaKnown RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 UBE2IP63279 158 aaKnown RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TNNC1P63316 161 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 AKR1C1Q04828 323 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 ZNF345Q14585 488 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 VAMP3Q15836 100 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 NDUFA5Q16718 116 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 ACSM3Q53FZ2 586 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LCN8Q6JVE9 175 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 DHFR2Q86XF0 187 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 C17orf78Q8N4C9 275 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LINC00471Q8N535 108 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 OR2Y1Q8NGV0 311 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TSKUQ8WUA8 353 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 RAB2BQ8WUD1 216 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 MITD1Q8WV92 249 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TLCD1Q96CP7 247 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 MS4A6EQ96DS6 147 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 SMIM12Q96EX1 92 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CPNE2Q96FN4 548 aaPredicted RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LINC00526Q96FQ7 95 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 FAM210AQ96ND0 272 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 ERMAPQ96PL5 475 aaPredicted RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 AMELYQ99218 206 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM109Q9BVC6 243 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 KRTAP2-1Q9BYU5 128 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CISHQ9NSE2 258 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 ENPP5Q9UJA9 477 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 KLK9Q9UKQ9 250 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CFAP45Q9UL16 551 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 HDGFL3Q9Y3E1 203 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TIMM22Q9Y584 194 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LHFPL6Q9Y693 200 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 NCOR1O75376 2440 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CREBBPQ92793 2442 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 ANAPC1Q9H1A4 1944 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 NUP160Q12769 1436 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 KIF27Q86VH2 1401 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CCDC88AQ3V6T2 1871 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 REREQ9P2R6 1566 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 TTC21AQ8NDW8 1320 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 VWFP04275 2813 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 DENND4CQ5VZ89 1909 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 TMED7-TICAM2A0A0A6YYA0 188 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 A0A1W2PPM0 123 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 METTL15A6NJ78 407 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 C9JCJ5 164 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 F5H5K5 113 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 SLC22A1O15245 554 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 ADAP1O75689 374 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 CSTAP01040 98 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 SHBGP04278 402 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 GRPRP30550 384 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 BRS3P32247 399 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 DLX6P56179 175 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 RAB8AP61006 207 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 HPCAP84074 193 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 XIAPP98170 497 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 SMAGPQ0VAQ4 97 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 ZNF846Q147U1 533 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 KCNJ8Q15842 424 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 NKAIN1Q4KMZ8 207 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 SAPCD1Q5SSQ6 148 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 AAED1Q7RTV5 226 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 OOSP2Q86WS3 158 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 GPHB5Q86YW7 130 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 TBC1D19Q8N5T2 526 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 Q8N814 137 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 SPERTQ8NA61 448 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 WFDC11Q8NEX6 87 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 LRRC20Q8TCA0 184 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM239Q8WW34 195 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 BORCS5Q969J3 196 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 UGT2B28Q9BY64 529 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 GNB1LQ9BYB4 327 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 MROQ9BYG7 248 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 RAB1BQ9H0U4 201 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 UBQLN4Q9NRR5 601 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 PARVAQ9NVD7 372 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 BAIAP2Q9UQB8 552 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 OTOGQ6ZRI0 2925 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 NPATQ14207 1427 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 ACANP16112 2415 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 FLNAP21333 2647 aaKnown RBP-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 HECTD1Q9ULT8 2610 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 ZANQ9Y493 2812 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 ZDBF2Q9HCK1 2354 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 ABCC12Q96J65 1359 aa-0.06□□□□□ -2.42
PDGFC-208ENST00000512711 PIEZO1Q92508 2521 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 DICER1Q9UPY3 1922 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 COL12A1Q99715 3063 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 LYSTQ99698 3801 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 LRP1BQ9NZR2 4599 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 NBEAL2Q6ZNJ1 2754 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 POLQO75417 2590 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 LOC110117498A0A087WWA1 95 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 TRBV10-2A0A0K0K1G8 114 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 DAPL1A0PJW8 107 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 FUOMA2VDF0 154 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 GOLGA6L10A6NI86 522 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms