RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TMEM167AQ8TBQ9 72 aa11.13□□□□□ -0.63
CCHCR1-229ENST00000512418 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
CCHCR1-229ENST00000512418 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
CCHCR1-229ENST00000512418 SLC2A8Q9NY64 477 aa11.13□□□□□ -0.63
CCHCR1-229ENST00000512418 TAS2R8Q9NYW2 309 aa11.13□□□□□ -0.63
CCHCR1-229ENST00000512418 DPPA5A6NC42 116 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 PPP5D1E7EU14 171 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 SSX5O60225 188 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 SPARTQ8N0X7 666 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 NEURL2Q9BR09 285 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 PLEKHA3Q9HB20 300 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 SLC2A9Q9NRM0 540 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 RHBDL2Q9NX52 303 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 SSR3Q9UNL2 185 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 RRP15Q9Y3B9 282 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 DMRT1Q9Y5R6 373 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
CCHCR1-229ENST00000512418 DNAH1Q9P2D7 4330 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 C2orf70A6NJV1 201 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 LGALS9O00182 355 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 DHFRP00374 187 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 HRASP01112 189 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 CRYGCP07315 174 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 ZNF735P0CB33 412 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 SCAND1P57086 179 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 ARPC4P59998 168 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 MSMO1Q15800 293 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 DEFB114Q30KQ6 69 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 LINC00322Q6ZN03 302 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 GAR1Q9NY12 217 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-229ENST00000512418 A0A1B0GW64 132 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 E7EUB6 86 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 CD7P09564 240 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 FOLR2P14207 255 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 SDC2P34741 201 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 C19orf35Q6ZS72 473 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 BEST4Q8NFU0 473 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 CCDC140Q96MF4 163 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 AIFM2Q9BRQ8 373 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 HIPK2Q9H2X6 1198 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
CCHCR1-229ENST00000512418 NDUFB8O95169 186 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 OR2C1O95371 312 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 AREGP15514 252 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 CTRB1P17538 263 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 PSMB6P28072 239 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 FCGR2CP31995 323 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 ARL3P36405 182 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 KLK9Q2XQG4 91 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 CTRB2Q6GPI1 263 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 SSX9Q7RTT3 188 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 Q9H521 79 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 RETNQ9HD89 108 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
CCHCR1-229ENST00000512418 A0A0A6YYH2 397 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 A6NJ64 397 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 TNFSF12O43508 249 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 PPYP01298 95 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 IGHV3-23P01764 117 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 HLA-GP17693 338 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 EDN2P20800 178 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 CBLN1P23435 193 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 MXD1Q05195 221 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 OR4A47Q6IF82 309 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 SPAG16Q8N0X2 631 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 YTHDF1Q9BYJ9 559 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 SRD5A3Q9H8P0 318 aa11.08□□□□□ -0.64
CCHCR1-229ENST00000512418 CCL28Q9NRJ3 127 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms