RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MAPK3P27361 379 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 RPL30P62888 115 aaKnown RBP13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 ST3GAL4Q11206 333 aa13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 MED21Q13503 144 aa13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 OR2B11Q5JQS5 317 aa13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 OR10J5Q8NHC4 309 aa13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 GALNT14Q96FL9 552 aa13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 MFFQ9GZY8 342 aa13.91□□□□□ -0.18
HMGCS1-206ENST00000511774 IGLV11-55A0A075B6I3 123 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 IRGMA1A4Y4 181 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 FCGR3BO75015 233 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 GALP22466 123 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 PSMB6P28072 239 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 GPR183P32249 361 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 MAP2K4P45985 399 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 MFAP2P55001 183 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 TPBGQ13641 420 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 OR11H2Q8NH07 326 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 PHYHIPQ92561 330 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 ADTRPQ96IZ2 230 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 URM1Q9BTM9 101 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 C9orf16Q9BUW7 83 aa13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 ZNF436Q9C0F3 470 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-206ENST00000511774 HERC1Q15751 4861 aa13.9□□□□□ -0.19
HMGCS1-206ENST00000511774 PRSS29PA6NIE9 313 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 FCGR3AP08637 254 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 RPA2P15927 270 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 TCTAP57738 103 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 TTC23Q5W5X9 447 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 ZNF502Q8TBZ5 544 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 CD300LFQ8TDQ1 290 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 OR51E2Q9H255 320 aa13.89□□□□□ -0.19
HMGCS1-206ENST00000511774 IGKV1D-8A0A087WSZ0 117 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 EFCAB10A6NFE3 127 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 CREBL2O60519 120 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 CIB2O75838 187 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 ELLP55199 621 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 BRWD1-AS2P59051 145 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 LAIR2Q6ISS4 152 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 H1FOOQ8IZA3 346 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 PUSL1Q8N0Z8 303 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 TMEM190Q8WZ59 177 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 DCUN1D5Q9BTE7 237 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 CSTL1Q9H114 145 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 UFC1Q9Y3C8 167 aa13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 RBM7Q9Y580 266 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-206ENST00000511774 IGHV3OR16-8A0A075B7F1 116 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 TRBV7-1A0A0A6YYK4 115 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 J3QRK9 145 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 KBTBD11O94819 623 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 WNT4P56705 351 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 CLDN12P56749 244 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 TMEM167AQ8TBQ9 72 aa13.87□□□□□ -0.19
HMGCS1-206ENST00000511774 MPTX1A8MV57 137 aa13.86□□□□□ -0.19
HMGCS1-206ENST00000511774 IGLV2-14P01704 120 aa13.86□□□□□ -0.19
HMGCS1-206ENST00000511774 MED22Q15528 200 aa13.86□□□□□ -0.19
HMGCS1-206ENST00000511774 ZNF414Q96IQ9 312 aa13.86□□□□□ -0.19
HMGCS1-206ENST00000511774 OR2A7Q96R45 310 aa13.86□□□□□ -0.19
HMGCS1-206ENST00000511774 LRP1BQ9NZR2 4599 aa13.86□□□□□ -0.19
HMGCS1-206ENST00000511774 RAB27BO00194 218 aa13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 SLC17A2O00624 439 aa13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 DIRAS3O95661 229 aa13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 CDK1P06493 297 aa13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 CTSDP07339 412 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 PLET1Q6UQ28 207 aa13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 NANOGP1Q8N7R0 232 aa13.85□□□□□ -0.19
HMGCS1-206ENST00000511774 AGRNO00468 2067 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 OR4C46A6NHA9 309 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 ZNF207O43670 478 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 UCHL1P09936 223 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 HIST1H1BP16401 226 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 RASSF2P50749 326 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 ARFRP1Q13795 201 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 HSD17B12Q53GQ0 312 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 ZFP1Q6P2D0 407 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 KCTD9Q7L273 389 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 SSX9Q7RTT3 188 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 ZNF555Q8NEP9 628 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 CXorf58Q96LI9 332 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 GINS4Q9BRT9 223 aa13.84□□□□□ -0.19
HMGCS1-206ENST00000511774 M0R2N4 97 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 MYL12BO14950 172 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 TGOLN2O43493 480 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 PSMD7P51665 324 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 EIF4EBP1Q13541 118 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 Q8NAQ8 132 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 OR56B1Q8NGI3 324 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 GPHA2Q96T91 129 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 PLGRKTQ9HBL7 147 aa13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 SMPD3Q9NY59 655 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 AK6Q9Y3D8 172 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-206ENST00000511774 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 IGKV1D-13A0A0B4J2D9 117 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 RBMY1A1P0DJD3 496 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 RBMY1CP0DJD4 496 aa13.82□□□□□ -0.2
HMGCS1-206ENST00000511774 IGKV1-13P0DP09 117 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms