RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 EIF3GO75821 320 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP38-203ENST00000511739 C8orf88P0DMB2 117 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 GPR183P32249 361 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 SNRPEP62304 92 aaKnown RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 PPP1R32Q7Z5V6 425 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 TMEM167AQ8TBQ9 72 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 SIGLEC12Q96PQ1 595 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 WNT10AQ9GZT5 417 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 RPRMQ9NS64 109 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 PAM16Q9Y3D7 125 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 HS3ST3B1Q9Y662 390 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 A0A1W2PPV9 198 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 ZNF385CQ66K41 422 aaPredicted RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 RNASE6Q93091 150 aaKnown RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 SLIRPQ9GZT3 109 aaKnown RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 SDF2L1Q9HCN8 221 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 G6PC2Q9NQR9 355 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 SNRNP200O75643 2136 aaKnown RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 A0A0U1RQV5 110 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 ATP5LO75964 103 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 MMP16P51512 607 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 TDGF1P3P51864 188 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 UNC119Q13432 240 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 COTL1Q14019 142 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 GOLT1AQ6ZVE7 132 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 SLC25A45Q8N413 288 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 TMEM54Q969K7 222 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 ABHD1Q96SE0 405 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 FOXJ2Q9P0K8 574 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 HSF4Q9ULV5 492 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 EREGO14944 169 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 VSIG8P0DPA2 414 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 HKR1P10072 659 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 MUC1P15941 1255 aaPredicted RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 AWAT1Q58HT5 328 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 MIC13Q5XKP0 118 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 ZIC4Q8N9L1 334 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 FAM57AQ8TBR7 257 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 PKIBQ9C010 78 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 S4R3C0 116 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 TRAV24A0A0B4J272 114 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 ZIC3O60481 467 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 LEPROTL1O95214 131 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 RNASE4P34096 147 aaKnown RBP4.94□□□□□ -1.62
USP38-203ENST00000511739 GLRXP35754 106 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 SERF2P84101 59 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 BSPH1Q075Z2 132 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 C1QTNF12Q5T7M4 302 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 ARPC1AQ92747 370 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 FBXL15Q9H469 300 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 RBKSQ9H477 322 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 GREB1Q4ZG55 1949 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 AHCTF1Q8WYP5 2266 aa4.94□□□□□ -1.62
USP38-203ENST00000511739 PLXNA3P51805 1871 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 IGKV3D-20A0A0C4DH25 116 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OGG1O15527 345 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 NDUFB4O95168 129 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 IGHV3-48P01763 117 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 MT-ND6P03923 174 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 IL6RP08887 468 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 PTGDSP41222 190 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 RAG2P55895 527 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 CMC4P56277 68 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 ZP4Q12836 540 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 RTN4RL2Q86UN3 420 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 C10orf111Q8N326 155 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 FBLIM1Q8WUP2 373 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 NPIPB3Q92617 1050 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 KCNE5Q9UJ90 142 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 MGAMO43451 1857 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 NYNRINQ9P2P1 1898 aaKnown RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 H0Y980 276 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 STAG3L3P0CL85 134 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 SAA1P0DJI8 122 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 ATP6V0CP27449 155 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 DSCR9P59020 149 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 IGSF11Q5DX21 431 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 DMKNQ6E0U4 476 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 C10orf126Q8N4M7 172 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 CHCHD5Q9BSY4 110 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 TBL2Q9Y4P3 447 aaKnown RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 PITX3O75364 302 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 SCTP09683 121 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 PAX1P15863 534 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 HOXA5P20719 270 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 CEACAM8P31997 349 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 NPBWR2P48146 333 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 RPS11P62280 158 aaKnown RBP eCLIP4.93□□□□□ -1.62
USP38-203ENST00000511739 ZAR1Q86SH2 424 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 HOGA1Q86XE5 327 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR10AG1Q8NH19 301 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 SCARF2Q96GP6 870 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 SPAG8Q99932 426 aaPredicted RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 MRPS18AQ9NVS2 196 aaKnown RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 C21orf62Q9NYP8 219 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 TUBD1Q9UJT1 453 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR4C45A6NMZ5 311 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 OR11H12B2RN74 326 aa4.93□□□□□ -1.62
USP38-203ENST00000511739 DUSP14O95147 198 aaKnown RBP4.93□□□□□ -1.62
USP38-203ENST00000511739 ZP3P21754 424 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms