RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 SSX9Q7RTT3 188 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 MUC7Q8TAX7 377 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 AUNIPQ9H7T9 357 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 ZMAT4Q9H898 229 aa11.62□□□□□ -0.55
COL1A1-213ENST00000511732 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 A6NJ64 397 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 PPP5D1E7EU14 171 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 H0Y980 276 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 PPYP01298 95 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 ZNF735P0CB33 412 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 EDN2P20800 178 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
COL1A1-213ENST00000511732 C15orf32Q32M92 178 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 KCTD21Q4G0X4 260 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 CASC10Q5T4H9 136 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 SGPP2Q8IWX5 399 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 NECAP1Q8NC96 275 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 VSTM2AQ8TAG5 236 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 FANCD2OSQ96PS1 177 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
COL1A1-213ENST00000511732 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
COL1A1-213ENST00000511732 DYNC2H1Q8NCM8 4307 aaKnown RBP11.61□□□□□ -0.55
COL1A1-213ENST00000511732 MEIS3P1A6NDR6 274 aa11.6□□□□□ -0.55
COL1A1-213ENST00000511732 NPIPB5A8MRT5 1133 aa11.6□□□□□ -0.55
COL1A1-213ENST00000511732 HLA-AP01891 365 aaKnown RBP11.6□□□□□ -0.55
COL1A1-213ENST00000511732 AREGP15514 252 aa11.6□□□□□ -0.55
COL1A1-213ENST00000511732 SLC2A9Q9NRM0 540 aa11.6□□□□□ -0.55
COL1A1-213ENST00000511732 SULT1C2O00338 296 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 NDUFB8O95169 186 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 IGHV3-23P01764 117 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 CRYGCP07315 174 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 MAS1LP35410 378 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 FXYD4P59646 89 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 MSMO1Q15800 293 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 OR4A47Q6IF82 309 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 SPAG16Q8N0X2 631 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 Q8N402 240 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 CCDC140Q96MF4 163 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 SLC5A7Q9GZV3 580 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 DIABLOQ9NR28 239 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 FBXL7Q9UJT9 491 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 S4R3C0 116 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 STAB2Q8WWQ8 2551 aa11.59□□□□□ -0.55
COL1A1-213ENST00000511732 SACSQ9NZJ4 4579 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 TRAV3A0A0B4J244 114 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 OR2C1O95371 312 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 HRASP01112 189 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 REG1AP05451 166 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 CTRB1P17538 263 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 PSMB6P28072 239 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
COL1A1-213ENST00000511732 KLK9Q2XQG4 91 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 TIMM50Q3ZCQ8 353 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-213ENST00000511732 CTRB2Q6GPI1 263 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 ZNF818PQ6ZRF7 136 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 ZBTB34Q8NCN2 500 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 OR5AP2Q8NGF4 316 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 GIMAP1Q8WWP7 306 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 KCTD12Q96CX2 325 aaKnown RBP11.58□□□□□ -0.56
COL1A1-213ENST00000511732 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 BET1LQ9NYM9 111 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.56
COL1A1-213ENST00000511732 DPPA5A6NC42 116 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 ZNF785A8K8V0 405 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 XRCC3O43542 346 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 AIREO43918 545 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 HLA-GP17693 338 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 RPS19P39019 145 aaKnown RBP11.57□□□□□ -0.56
COL1A1-213ENST00000511732 KIR2DS2P43631 304 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 HAGHQ16775 308 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 YIPF6Q96EC8 236 aa11.57□□□□□ -0.56
COL1A1-213ENST00000511732 IGLV11-55A0A075B6I3 123 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 C2orf70A6NJV1 201 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL1A1-213ENST00000511732 TMEM127O75204 238 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 GGCTO75223 188 aaKnown RBP11.56□□□□□ -0.56
COL1A1-213ENST00000511732 HPRT1P00492 218 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 CBX5P45973 191 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 TAS2R31P59538 309 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 OR2B8PP59922 312 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 LSM3P62310 102 aaKnown RBP11.56□□□□□ -0.56
COL1A1-213ENST00000511732 POU2AF1Q16633 256 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 CLEC19AQ6UXS0 136 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 GTSCR1Q86UQ5 136 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 TMEM17Q86X19 198 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 OR2K2Q8NGT1 345 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 OR4A5Q8NH83 315 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 HRASLSQ9HDD0 168 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 ANAPC10Q9UM13 185 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 SELENOKQ9Y6D0 94 aa11.56□□□□□ -0.56
COL1A1-213ENST00000511732 MFSD2BA6NFX1 497 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms