RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 M0QZ24 198 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 SERPINE2P07093 398 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 FGF2P09038 288 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 RPA2P15927 270 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 MAS1LP35410 378 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 LPAR6P43657 344 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 CFHR3Q02985 330 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 PJVKQ0ZLH3 352 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 FOXE3Q13461 319 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 OR4A47Q6IF82 309 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 SSX9Q7RTT3 188 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 NDUFA11Q86Y39 141 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 TMEM167AQ8TBQ9 72 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 SLC25A21Q9BQT8 299 aaPredicted RBP10.11□□□□□ -0.79
COL6A6-203ENST00000511332 C5orf66Q9H5L9 145 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 TMEM140Q9NV12 185 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 TNCP24821 2201 aa10.11□□□□□ -0.79
COL6A6-203ENST00000511332 TEX13DA0A0J9YY54 714 aaPredicted RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 C3orf85A0A1B0GTC6 90 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 ARPC1BO15143 372 aaKnown RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 ATG12O94817 140 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 IGHG4P01861 327 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 ELANEP08246 267 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 CD40LGP29965 261 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 RPL8P62917 257 aaKnown RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 ZNF846Q147U1 533 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 RBMS2Q15434 407 aaKnown RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 AKIRIN2Q53H80 203 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 CXorf66Q5JRM2 361 aaPredicted RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 C10orf99Q6UWK7 81 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 CADM3Q8N126 398 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 TMEM68Q96MH6 324 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 PHB2Q99623 299 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 CITED2Q99967 270 aaPredicted RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 GPR132Q9UNW8 380 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 FBXO7Q9Y3I1 522 aa10.1□□□□□ -0.79
COL6A6-203ENST00000511332 TSSC4Q9Y5U2 329 aaPredicted RBP10.1□□□□□ -0.79
COL6A6-203ENST00000511332 TCRBV4S1A1TA0A5B7 111 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 CRYM-AS1A6NIL9 109 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 G3V318 75 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 SSBP2P81877 361 aaPredicted RBP10.09□□□□□ -0.79
COL6A6-203ENST00000511332 CD83Q01151 205 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 MRGPRG-AS1Q2M3A8 158 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 TRIM16LQ309B1 348 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 ZNF585BQ52M93 769 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 C19orf54Q5BKX5 351 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 UNQ5815/PRO19632Q6UWF5 114 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 SGPP2Q8IWX5 399 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 OR5M8Q8NGP6 311 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 SRSF12Q8WXF0 261 aaKnown RBP10.09□□□□□ -0.79
COL6A6-203ENST00000511332 TP53RKQ96S44 253 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 SPIN2AQ99865 258 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 SPIN2BQ9BPZ2 258 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 RTBDNQ9BSG5 229 aaPredicted RBP10.09□□□□□ -0.79
COL6A6-203ENST00000511332 FAM103A1Q9BTL3 118 aaKnown RBP10.09□□□□□ -0.79
COL6A6-203ENST00000511332 NAA60Q9H7X0 242 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 VSIG4Q9Y279 399 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 WSB1Q9Y6I7 421 aa10.09□□□□□ -0.79
COL6A6-203ENST00000511332 A0A1W2PN81 502 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 KRASP01116 189 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
COL6A6-203ENST00000511332 HLA-GP17693 338 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 UCP1P25874 307 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 PSMB8P28062 276 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 PPIFP30405 207 aaKnown RBP10.08□□□□□ -0.8
COL6A6-203ENST00000511332 G6PCP35575 357 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 CHRNA7P36544 502 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 RPL27AP46776 148 aaKnown RBP10.08□□□□□ -0.8
COL6A6-203ENST00000511332 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 TMEM65Q6PI78 240 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 RNF152Q8N8N0 203 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 MINDY2Q8NBR6 621 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 LFNGQ8NES3 379 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 TSC22D3Q99576 134 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 TMEM222Q9H0R3 208 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
COL6A6-203ENST00000511332 LINC00854A0A1B0GVQ3 168 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 H3BUA1 57 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 UPK2O00526 184 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 SNAPC5O75971 98 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 IGLV1-40P01703 118 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 OR5AC1P0C628 307 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 ANXA3P12429 323 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 SLC6A1P30531 599 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 AKR1C2P52895 323 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 RPL23AP62750 156 aaKnown RBP10.07□□□□□ -0.8
COL6A6-203ENST00000511332 DHODHQ02127 395 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 NSUN5P1Q3KNT7 163 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 H2BFWTQ7Z2G1 175 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 TMED4Q7Z7H5 227 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 GALNT14Q96FL9 552 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 COMMD5Q9GZQ3 224 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 KCNIP3Q9Y2W7 256 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 DNHD1Q96M86 4753 aa10.07□□□□□ -0.8
COL6A6-203ENST00000511332 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms