RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 COPS9Q8WXC6 57 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 CLEC7AQ9BXN2 247 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 ZNFX1Q9P2E3 1918 aaKnown RBP9.01□□□□□ -0.97
NEK1-206ENST00000510533 LIPFP07098 398 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 TGIF1Q15583 401 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 STPG1Q5TH74 334 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 NPIPB11E5RHQ5 1161 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 CYP2G1PQ6ZSU1 146 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 C1QL2Q7Z5L3 287 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 ARF6P62330 175 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 SAPCD1Q5SSQ6 148 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 LOXL4Q96JB6 756 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 SPSB2Q99619 263 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 LINC00470Q9BZP3 86 aa9.01□□□□□ -0.97
NEK1-206ENST00000510533 A8MXK9 166 aa9□□□□□ -0.97
NEK1-206ENST00000510533 MOSP00540 346 aa9□□□□□ -0.97
NEK1-206ENST00000510533 IGHV3-48P01763 117 aa9□□□□□ -0.97
NEK1-206ENST00000510533 PEAR1Q5VY43 1037 aaPredicted RBP9□□□□□ -0.97
NEK1-206ENST00000510533 LAMTOR1Q6IAA8 161 aa9□□□□□ -0.97
NEK1-206ENST00000510533 AKIRIN1Q9H9L7 192 aaPredicted RBP9□□□□□ -0.97
NEK1-206ENST00000510533 SEC16AO15027 2179 aa9□□□□□ -0.97
NEK1-206ENST00000510533 CKAP5Q14008 2032 aa9□□□□□ -0.97
NEK1-206ENST00000510533 IGHV3OR16-12A0A075B7B8 117 aa9□□□□□ -0.97
NEK1-206ENST00000510533 A1L4Q6 167 aa9□□□□□ -0.97
NEK1-206ENST00000510533 CTAG1AP78358 180 aa9□□□□□ -0.97
NEK1-206ENST00000510533 ZNF362Q5T0B9 420 aaPredicted RBP9□□□□□ -0.97
NEK1-206ENST00000510533 RAX2Q96IS3 184 aa9□□□□□ -0.97
NEK1-206ENST00000510533 MOB4Q9Y3A3 225 aa9□□□□□ -0.97
NEK1-206ENST00000510533 TRBV20OR9-2A0A075B6H5 130 aa9□□□□□ -0.97
NEK1-206ENST00000510533 A0A1W2PQM1 296 aa9□□□□□ -0.97
NEK1-206ENST00000510533 IL4P05112 153 aa9□□□□□ -0.97
NEK1-206ENST00000510533 SRP19P09132 144 aaKnown RBP9□□□□□ -0.97
NEK1-206ENST00000510533 NPPCP23582 126 aa9□□□□□ -0.97
NEK1-206ENST00000510533 GPX4P36969 197 aaPredicted RBP9□□□□□ -0.97
NEK1-206ENST00000510533 RPL39P5Q59GN2 51 aa9□□□□□ -0.97
NEK1-206ENST00000510533 C19orf48Q6RUI8 117 aa9□□□□□ -0.97
NEK1-206ENST00000510533 KIR2DL4Q99706 377 aa9□□□□□ -0.97
NEK1-206ENST00000510533 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
NEK1-206ENST00000510533 IL36BQ9NZH7 164 aa9□□□□□ -0.97
NEK1-206ENST00000510533 PILRBQ9UKJ0 227 aa9□□□□□ -0.97
NEK1-206ENST00000510533 RNF115Q9Y4L5 304 aa9□□□□□ -0.97
NEK1-206ENST00000510533 TNFSF10P50591 281 aa9□□□□□ -0.97
NEK1-206ENST00000510533 WDYHV1Q96HA8 205 aa9□□□□□ -0.97
NEK1-206ENST00000510533 C9orf172C9J069 976 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 SYNGR3O43761 229 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 TSPOP30536 169 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 EEF1AKMT3Q96AZ1 226 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 UCP1P25874 307 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 ZNF414Q96IQ9 312 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 RTBDNQ9BSG5 229 aaPredicted RBP8.99□□□□□ -0.97
NEK1-206ENST00000510533 RGPD4Q7Z3J3 1758 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 LOC105371242A0A075B767 164 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 IGKV3D-11A0A0A0MRZ8 115 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 NPIPB7O75200 414 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 FOXA3P55318 350 aaPredicted RBP8.99□□□□□ -0.97
NEK1-206ENST00000510533 HIST1H1AQ02539 215 aaPredicted RBP8.99□□□□□ -0.97
NEK1-206ENST00000510533 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 PNKDQ8N490 385 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 DNASE2BQ8WZ79 361 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 MRPL13Q9BYD1 178 aaKnown RBP8.99□□□□□ -0.97
NEK1-206ENST00000510533 PEF1Q9UBV8 284 aaKnown RBP8.99□□□□□ -0.97
NEK1-206ENST00000510533 CCDC88CQ9P219 2028 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 C12orf77C9JDV5 145 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 ZNF56Q15929 161 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 MEIG1Q5JSS6 88 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 PAPPA-AS1Q5QFB9 102 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 IFI27L2Q9H2X8 130 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 IGHV1-69-2A0A0G2JMI3 117 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 FOXI3A8MTJ6 420 aaPredicted RBP8.99□□□□□ -0.97
NEK1-206ENST00000510533 OR11H12B2RN74 326 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 FAM74A4Q5TZK3 123 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 ZNRF1Q8ND25 227 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 OR11H1Q8NG94 326 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 OR11H2Q8NH07 326 aa8.99□□□□□ -0.97
NEK1-206ENST00000510533 RAMP1O60894 148 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 CGAP01215 116 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 MYO16Q9Y6X6 1858 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 RNF222A6NCQ9 220 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 STARD6P59095 220 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 TFF3Q07654 80 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 ICAM4Q14773 271 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 ACP7Q6ZNF0 438 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 CLDND2Q8NHS1 167 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
NEK1-206ENST00000510533 COL24A1Q17RW2 1714 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 SLC17A3O00476 420 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 ACSF3Q4G176 576 aaPredicted RBP8.98□□□□□ -0.97
NEK1-206ENST00000510533 Q6ZT83 130 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 OSR1Q8TAX0 266 aaPredicted RBP8.98□□□□□ -0.97
NEK1-206ENST00000510533 TIMP4Q99727 224 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 TRIP12Q14669 1992 aaPredicted RBP8.98□□□□□ -0.97
NEK1-206ENST00000510533 IGKV1D-43A0A0B4J1Z2 117 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 NBEAP1P0C6P0 100 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 EMP1P54849 157 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 WNT10AQ9GZT5 417 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 TMEM160Q9NX00 188 aa8.98□□□□□ -0.97
NEK1-206ENST00000510533 FOXJ2Q9P0K8 574 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms