RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OR51S1Q8NGJ8 323 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 OR5M8Q8NGP6 311 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 OR13C8Q8NGS7 320 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 GRPEL2Q8TAA5 225 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 WIPF2Q8TF74 440 aaPredicted RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 NOL4LQ96MY1 436 aaPredicted RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 CLCC1Q96S66 551 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 TSC22D3Q99576 134 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 PHB2Q99623 299 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 SLC25A21Q9BQT8 299 aaPredicted RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 C7orf50Q9BRJ6 194 aaKnown RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 CCDC32Q9BV29 185 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 WDR12Q9GZL7 423 aaKnown RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 BET1LQ9NYM9 111 aa7.2□□□□□ -1.26
NUP54-207ENST00000508583 FOXA2Q9Y261 457 aaPredicted RBP7.2□□□□□ -1.26
NUP54-207ENST00000508583 TEX13DA0A0J9YY54 714 aaPredicted RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 MARCH11A6NNE9 402 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 SNAPC5O75971 98 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 ZNF735P0CB33 412 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 CD28P10747 220 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 ANXA3P12429 323 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 CD83Q01151 205 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 SRSF4Q08170 494 aaKnown RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 RBMS2Q15434 407 aaKnown RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 TNXAQ16473 311 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 ECSCRQ19T08 205 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 PRR31Q5SQ13 230 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 THOC7Q6I9Y2 204 aaKnown RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 FAAP20Q6NZ36 180 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 ZNF329Q86UD4 541 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 SLC25A42Q86VD7 318 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 SGPP2Q8IWX5 399 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 MRPL41Q8IXM3 137 aaKnown RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 PUSL1Q8N0Z8 303 aaKnown RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 RNF152Q8N8N0 203 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 TMEM167AQ8TBQ9 72 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 MARCH1Q8TCQ1 289 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 R3HDM4Q96D70 268 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 GPHA2Q96T91 129 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 CITED2Q99967 270 aaPredicted RBP7.19□□□□□ -1.26
NUP54-207ENST00000508583 SLA2Q9H6Q3 261 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 FKBP11Q9NYL4 201 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 KCNIP3Q9Y2W7 256 aa7.19□□□□□ -1.26
NUP54-207ENST00000508583 C3orf85A0A1B0GTC6 90 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 A0A1W2PN81 502 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 H3BUA1 57 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 FCN1O00602 326 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 CYB5BO43169 146 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 S1PR2O95136 353 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 DHFRP00374 187 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 KRASP01116 189 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 PF4V1P10720 104 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 HLA-GP17693 338 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 CHRNA7P36544 502 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 LPAR6P43657 344 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 KRTAP10-3P60369 221 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 SRPXP78539 464 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 NDPQ00604 133 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 DHODHQ02127 395 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 CFHR3Q02985 330 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 TRIM16LQ309B1 348 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 OR4A47Q6IF82 309 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 UNQ5815/PRO19632Q6UWF5 114 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 SSX9Q7RTT3 188 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 HSD17B13Q7Z5P4 300 aaPredicted RBP7.18□□□□□ -1.26
NUP54-207ENST00000508583 VKORC1L1Q8N0U8 176 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 MINDY2Q8NBR6 621 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 SRSF12Q8WXF0 261 aaKnown RBP7.18□□□□□ -1.26
NUP54-207ENST00000508583 SRSF8Q9BRL6 282 aaKnown RBP7.18□□□□□ -1.26
NUP54-207ENST00000508583 COMMD5Q9GZQ3 224 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 ZNF430Q9H8G1 570 aaPredicted RBP7.18□□□□□ -1.26
NUP54-207ENST00000508583 TPSG1Q9NRR2 321 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 TMEM140Q9NV12 185 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 CACFD1Q9UGQ2 172 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 LINC00527Q9UJ94 153 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 PRNDQ9UKY0 176 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 GPR132Q9UNW8 380 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 NUBP2Q9Y5Y2 271 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 WSB1Q9Y6I7 421 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 PLXNB1O43157 2135 aa7.18□□□□□ -1.26
NUP54-207ENST00000508583 TNCP24821 2201 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 LINC01548A6NM66 108 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 PF4P02776 101 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 IL7P13232 177 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 PI3P19957 117 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 PSMB8P28062 276 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
NUP54-207ENST00000508583 RPL27AP46776 148 aaKnown RBP7.17□□□□□ -1.26
NUP54-207ENST00000508583 AKR1C2P52895 323 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 BRWD1-AS2P59051 145 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 RPL23AP62750 156 aaKnown RBP7.17□□□□□ -1.26
NUP54-207ENST00000508583 ZNF846Q147U1 533 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 NSUN5P1Q3KNT7 163 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 FAM209BQ5JX69 171 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 H2BFWTQ7Z2G1 175 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 LFNGQ8NES3 379 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 RNASE11Q8TAA1 199 aaKnown RBP7.17□□□□□ -1.26
NUP54-207ENST00000508583 RRNAD1Q96FB5 475 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms