RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NQO2P16083 231 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 TSPAN5P62079 268 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 MRPS10P82664 201 aaKnown RBP15.39■□□□□ 0.05
SFXN1-209ENST00000508290 DGCR2P98153 550 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 POU2AF1Q16633 256 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 FAM209BQ5JX69 171 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 VAX1Q5SQQ9 334 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 ASPHD1Q5U4P2 390 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 AADACL3Q5VUY0 350 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 CLVS1Q8IUQ0 354 aaPredicted RBP15.39■□□□□ 0.05
SFXN1-209ENST00000508290 LYSMD2Q8IV50 215 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 COMMD9Q9P000 198 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 EXTL2Q9UBQ6 330 aa15.39■□□□□ 0.05
SFXN1-209ENST00000508290 ZP3P21754 424 aa15.38■□□□□ 0.05
SFXN1-209ENST00000508290 HLA-DMAP28067 261 aa15.38■□□□□ 0.05
SFXN1-209ENST00000508290 BRWD1-AS2P59051 145 aa15.38■□□□□ 0.05
SFXN1-209ENST00000508290 CADM3Q8N126 398 aa15.38■□□□□ 0.05
SFXN1-209ENST00000508290 ADAD2Q8NCV1 583 aaKnown RBP15.38■□□□□ 0.05
SFXN1-209ENST00000508290 RANGRFQ9HD47 186 aaPredicted RBP15.38■□□□□ 0.05
SFXN1-209ENST00000508290 FAM212BQ9NTI7 297 aaPredicted RBP15.38■□□□□ 0.05
SFXN1-209ENST00000508290 COA4Q9NYJ1 87 aa15.38■□□□□ 0.05
SFXN1-209ENST00000508290 CCDC59Q9P031 241 aaKnown RBP15.38■□□□□ 0.05
SFXN1-209ENST00000508290 FAM223BA6NKX1 122 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 GPR31O00270 319 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 OVOL1O14753 267 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 PRB2P02812 416 aaPredicted RBP15.37■□□□□ 0.05
SFXN1-209ENST00000508290 HOXD3P31249 432 aaPredicted RBP15.37■□□□□ 0.05
SFXN1-209ENST00000508290 RPL8P62917 257 aaKnown RBP15.37■□□□□ 0.05
SFXN1-209ENST00000508290 ZNF429Q86V71 674 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 FAM223AQ8IWN6 122 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 TTC9CQ8N5M4 171 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 CASTOR1Q8WTX7 329 aa15.37■□□□□ 0.05
SFXN1-209ENST00000508290 RGS5O15539 181 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 DHFRP00374 187 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 F2RP25116 425 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 RPL27AP46776 148 aaKnown RBP15.36■□□□□ 0.05
SFXN1-209ENST00000508290 UCP3P55916 312 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 SSBP1Q04837 148 aaKnown RBP15.36■□□□□ 0.05
SFXN1-209ENST00000508290 VKORC1L1Q8N0U8 176 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 ARRDC1Q8N5I2 433 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 OR51H1Q8NH63 302 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 SRSF8Q9BRL6 282 aaKnown RBP15.36■□□□□ 0.05
SFXN1-209ENST00000508290 ZNF257Q9Y2Q1 563 aa15.36■□□□□ 0.05
SFXN1-209ENST00000508290 PGLYRP1O75594 196 aaPredicted RBP15.35■□□□□ 0.05
SFXN1-209ENST00000508290 IGHV3-11P01762 117 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 IFNA6P05013 189 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 HLA-GP17693 338 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 KRTAP10-11P60412 298 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 ERVK-16P61578 105 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 SPCS2Q15005 226 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 RNASE10Q5GAN6 216 aaKnown RBP15.35■□□□□ 0.05
SFXN1-209ENST00000508290 THOC7Q6I9Y2 204 aaKnown RBP15.35■□□□□ 0.05
SFXN1-209ENST00000508290 OR4A47Q6IF82 309 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 SLC38A6Q8IZM9 456 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 FCAMRQ8WWV6 532 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 DCUN1D4Q92564 292 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 GPHA2Q96T91 129 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 FXYD6Q9H0Q3 95 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 HRASLSQ9HDD0 168 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 MTFP1Q9UDX5 166 aa15.35■□□□□ 0.05
SFXN1-209ENST00000508290 IGHV4OR15-8A0A075B7B6 117 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 A0A087WW49 117 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 DPPA5A6NC42 116 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 NPIPB5A8MRT5 1133 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 RLN1P04808 185 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 ZNF735P0CB33 412 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 ZNF343Q6P1L6 599 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 NECAP1Q8NC96 275 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 DYNC2LI1Q8TCX1 351 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 DGCR14Q96DF8 476 aaKnown RBP15.34■□□□□ 0.05
SFXN1-209ENST00000508290 ZNF486Q96H40 463 aaPredicted RBP15.34■□□□□ 0.05
SFXN1-209ENST00000508290 ALX4Q9H161 411 aaPredicted RBP15.34■□□□□ 0.05
SFXN1-209ENST00000508290 SLC2A9Q9NRM0 540 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 SCOCQ9UIL1 159 aa15.34■□□□□ 0.05
SFXN1-209ENST00000508290 TRBV9A0A0B4J1U6 114 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 GABARAPH6UMI1 98 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 SSX9Q7RTT3 188 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 HSD17B13Q7Z5P4 300 aaPredicted RBP15.33■□□□□ 0.04
SFXN1-209ENST00000508290 DMBX1Q8NFW5 382 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 RSRP1Q9BUV0 290 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 ELOVL1Q9BW60 279 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 COMMD5Q9GZQ3 224 aa15.33■□□□□ 0.04
SFXN1-209ENST00000508290 MARCH11A6NNE9 402 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 TEX22C9J3V5 150 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 K7EIL1 84 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 IL6RP08887 468 aaPredicted RBP15.32■□□□□ 0.04
SFXN1-209ENST00000508290 HIST1H1BP16401 226 aaKnown RBP15.32■□□□□ 0.04
SFXN1-209ENST00000508290 TAS2R19P59542 299 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 RHOGP84095 191 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 TATDN3Q17R31 274 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 C10orf55Q5SWW7 151 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 LAX1Q8IWV1 398 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 OR52I2Q8NH67 350 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 DLX4Q92988 240 aaPredicted RBP15.32■□□□□ 0.04
SFXN1-209ENST00000508290 ABHD1Q96SE0 405 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 TMEM140Q9NV12 185 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 PEF1Q9UBV8 284 aaKnown RBP15.32■□□□□ 0.04
SFXN1-209ENST00000508290 KLK11Q9UBX7 282 aa15.32■□□□□ 0.04
SFXN1-209ENST00000508290 PRKDCP78527 4128 aaKnown RBP15.31■□□□□ 0.04
SFXN1-209ENST00000508290 UPK2O00526 184 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms