RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CTDSP1Q9GZU7 261 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 ARFGEF3Q5TH69 2177 aa9.02□□□□□ -0.97
LIN54-207ENST00000508171 GFRA3O60609 400 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 RD3LP0DJH9 198 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 CGB3P0DN86 165 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 CGB7P0DN87 165 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 VDAC2P45880 294 aaPredicted RBP9.01□□□□□ -0.97
LIN54-207ENST00000508171 ACOT6Q3I5F7 207 aaPredicted RBP9.01□□□□□ -0.97
LIN54-207ENST00000508171 AARDQ4LEZ3 155 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 TREML4Q6UXN2 200 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 OR5T1Q8NG75 326 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 OR10D4PQ8NGN7 298 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 PPP1R35Q8TAP8 253 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 MANBALQ9NQG1 85 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 AURKAIP1Q9NWT8 199 aaPredicted RBP9.01□□□□□ -0.97
LIN54-207ENST00000508171 ANKRD11Q6UB99 2663 aaPredicted RBP9.01□□□□□ -0.97
LIN54-207ENST00000508171 C11orf94C9JXX5 98 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 S100A2P29034 98 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 FAM27E3Q08E93 113 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 DDB2Q92466 427 aa9.01□□□□□ -0.97
LIN54-207ENST00000508171 PRSS46E5RG02 174 aa9□□□□□ -0.97
LIN54-207ENST00000508171 PPP1R2P9O14990 202 aa9□□□□□ -0.97
LIN54-207ENST00000508171 IGHV2-70P01814 119 aa9□□□□□ -0.97
LIN54-207ENST00000508171 MYOD1P15172 320 aa9□□□□□ -0.97
LIN54-207ENST00000508171 S100PP25815 95 aa9□□□□□ -0.97
LIN54-207ENST00000508171 ERVK-16P61578 105 aa9□□□□□ -0.97
LIN54-207ENST00000508171 SDSLQ96GA7 329 aa9□□□□□ -0.97
LIN54-207ENST00000508171 MS4A5Q9H3V2 200 aa9□□□□□ -0.97
LIN54-207ENST00000508171 GCM1Q9NP62 436 aa9□□□□□ -0.97
LIN54-207ENST00000508171 CUL9Q8IWT3 2517 aa9□□□□□ -0.97
LIN54-207ENST00000508171 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
LIN54-207ENST00000508171 SEC14L6B5MCN3 397 aa9□□□□□ -0.97
LIN54-207ENST00000508171 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
LIN54-207ENST00000508171 ATP5G3P48201 142 aa9□□□□□ -0.97
LIN54-207ENST00000508171 MIC13Q5XKP0 118 aa9□□□□□ -0.97
LIN54-207ENST00000508171 OR10A7Q8NGE5 316 aa9□□□□□ -0.97
LIN54-207ENST00000508171 OR4X1Q8NH49 305 aa9□□□□□ -0.97
LIN54-207ENST00000508171 SNRNP40Q96DI7 357 aaKnown RBP9□□□□□ -0.97
LIN54-207ENST00000508171 NEIL1Q96FI4 390 aaPredicted RBP9□□□□□ -0.97
LIN54-207ENST00000508171 C1orf159Q96HA4 380 aa9□□□□□ -0.97
LIN54-207ENST00000508171 DIRC2Q96SL1 478 aa9□□□□□ -0.97
LIN54-207ENST00000508171 MGST2Q99735 147 aa9□□□□□ -0.97
LIN54-207ENST00000508171 DERL1Q9BUN8 251 aa9□□□□□ -0.97
LIN54-207ENST00000508171 DCAF16Q9NXF7 216 aa9□□□□□ -0.97
LIN54-207ENST00000508171 SPTBN2O15020 2390 aa9□□□□□ -0.97
LIN54-207ENST00000508171 IGLV3-9A0A075B6K5 115 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 RBFOX2O43251 390 aaKnown RBP eCLIP8.99□□□□□ -0.97
LIN54-207ENST00000508171 MMP23AO75900 390 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 GYPAP02724 150 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 GALR1P47211 349 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 CST9LP1Q5W188 147 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 RHOVQ96L33 236 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 PCGF1Q9BSM1 259 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 TMEM204Q9BSN7 226 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 GAB2Q9UQC2 676 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 TCF19Q9Y242 345 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 KBTBD11-OT1A0A1B0GTJ5 212 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 A0A1W2PPV4 95 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 FAM90A9PA6NNJ1 464 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 H7BYZ3 331 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 TM4SF5O14894 197 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 FABP4P15090 132 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 GNB1P62873 340 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 IGFL3Q6UXB1 125 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 TCF23Q7RTU1 214 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 LYG1Q8N1E2 194 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 SSMEM1Q8WWF3 244 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 CCL13Q99616 98 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 GFOD1Q9NXC2 390 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 ZNRD1Q9P1U0 126 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 ACACAQ13085 2346 aa8.99□□□□□ -0.97
LIN54-207ENST00000508171 PGPEP1LA6NFU8 196 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 NDUFB4O95168 129 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 IGHV1-46P01743 117 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 GNG10P50151 68 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 OR4A47Q6IF82 309 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 LINC00469Q8N7U9 141 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 ZNF383Q8NA42 475 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 RNF7Q9UBF6 113 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 A0A1W2PPQ1 181 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 SOX15O60248 233 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 RPP30P78346 268 aaKnown RBP8.98□□□□□ -0.97
LIN54-207ENST00000508171 TNFAIP6P98066 277 aaPredicted RBP8.98□□□□□ -0.97
LIN54-207ENST00000508171 PDLIM3Q53GG5 364 aaPredicted RBP8.98□□□□□ -0.97
LIN54-207ENST00000508171 C1orf185Q5T7R7 199 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 Q6ZS92 163 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 FAM216BQ8N7L0 139 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 RBMXL3Q8N7X1 1067 aaKnown RBP8.98□□□□□ -0.97
LIN54-207ENST00000508171 OR4S2Q8NH73 311 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 GGTLC1Q9BX51 225 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 SRD5A3Q9H8P0 318 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 PXMP4Q9Y6I8 212 aa8.98□□□□□ -0.97
LIN54-207ENST00000508171 CHRNA7P36544 502 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms