RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 OR6Q1Q8NGQ2 317 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 OR13F1Q8NGS4 319 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 VSTM2AQ8TAG5 236 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 SECTM1Q8WVN6 248 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 ACOT12Q8WYK0 555 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 SLC25A46Q96AG3 418 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 WDR89Q96FK6 387 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 OR2A7Q96R45 310 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 OR4C12Q96R67 309 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 PHB2Q99623 299 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 SPIN2AQ99865 258 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 SPIN2BQ9BPZ2 258 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 DCUN1D5Q9BTE7 237 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 VCX3AQ9NNX9 186 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 CCL28Q9NRJ3 127 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 COA4Q9NYJ1 87 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 TAS2R8Q9NYW2 309 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 PEF1Q9UBV8 284 aaKnown RBP6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 SMAD5-AS1Q9Y6J3 95 aa6.94□□□□□ -1.3
PDLIM5-209ENST00000506632 FAM223BA6NKX1 122 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 E7EUB6 86 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 ACTL6BO94805 426 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 LY86O95711 162 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 IL6RP08887 468 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF735P0CB33 412 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 GP9P14770 177 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 NAT1P18440 290 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 MAS1LP35410 378 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 KIR2DS2P43631 304 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 RHOGP84095 191 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 POU2AF1Q16633 256 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 KLK9Q2XQG4 91 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 FAM223AQ8IWN6 122 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 SAMD12Q8N8I0 201 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 S100A16Q96FQ6 103 aaKnown RBP6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 WWC2-AS2Q96NR7 200 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 ELOVL1Q9BW60 279 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 FUNDC2Q9BWH2 189 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 SLC5A7Q9GZV3 580 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 AKIP1Q9NQ31 210 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 KLK9Q9UKQ9 250 aa6.93□□□□□ -1.3
PDLIM5-209ENST00000506632 MEIS3P1A6NDR6 274 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 HMX3A6NHT5 357 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 NPIPB5A8MRT5 1133 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 BMPR1BO00238 502 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 MPPED1O15442 326 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 TNFSF12O43508 249 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 HRASP01112 189 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 PRH1P02810 166 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 FCER2P06734 321 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 FGF2P09038 288 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 GNRHRP30968 328 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 RPL27AP46776 148 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 TAS2R20P59543 309 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 NCS1P62166 190 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 EXOSC2Q13868 293 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 TMEM69Q5SWH9 247 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 DHRS11Q6UWP2 260 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF818PQ6ZRF7 136 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 HAPLN4Q86UW8 402 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 SLC25A42Q86VD7 318 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 SPAG16Q8N0X2 631 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 Q8N1Y9 231 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 NECAP1Q8NC96 275 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 OR9G4Q8NGQ1 327 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 IFT46Q9NQC8 304 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 SLC2A9Q9NRM0 540 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 BET1LQ9NYM9 111 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 SIGLEC8Q9NYZ4 499 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF257Q9Y2Q1 563 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 DMRT1Q9Y5R6 373 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 U3KQK5 164 aa6.92□□□□□ -1.3
PDLIM5-209ENST00000506632 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CGB1A6NKQ9 187 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 HPRT1P00492 218 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 EIF4EP06730 217 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CRYGCP07315 174 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CSN3P07498 182 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CTRB1P17538 263 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 RFX2P48378 723 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 TAS2R31P59538 309 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 FXYD4P59646 89 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 RPL8P62917 257 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 ATP5G2Q06055 141 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CATR1Q13166 79 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CTRB2Q6GPI1 263 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 OR4A47Q6IF82 309 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 C19orf35Q6ZS72 473 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 SSX9Q7RTT3 188 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 TMEM17Q86X19 198 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 OR4A5Q8NH83 315 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 GPX8Q8TED1 209 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 MOB3AQ96BX8 217 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 CMTM3Q96MX0 182 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 FANCD2OSQ96PS1 177 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 ASCL2Q99929 193 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 AIFM2Q9BRQ8 373 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms