RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 RCVRNP35243 200 aa12□□□□□ -0.49
MED28-204ENST00000506409 SLURP1P55000 103 aa12□□□□□ -0.49
MED28-204ENST00000506409 TSPAN5P62079 268 aa12□□□□□ -0.49
MED28-204ENST00000506409 DGCR2P98153 550 aa12□□□□□ -0.49
MED28-204ENST00000506409 SPCS2Q15005 226 aa12□□□□□ -0.49
MED28-204ENST00000506409 ADAD2Q8NCV1 583 aaKnown RBP12□□□□□ -0.49
MED28-204ENST00000506409 TMEM167AQ8TBQ9 72 aa12□□□□□ -0.49
MED28-204ENST00000506409 RAB2BQ8WUD1 216 aa12□□□□□ -0.49
MED28-204ENST00000506409 AIFM2Q9BRQ8 373 aa12□□□□□ -0.49
MED28-204ENST00000506409 EXTL2Q9UBQ6 330 aa12□□□□□ -0.49
MED28-204ENST00000506409 HPRT1P00492 218 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 DEFA5Q01523 94 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 CD300LFQ8TDQ1 290 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 DLX4Q92988 240 aaPredicted RBP11.99□□□□□ -0.49
MED28-204ENST00000506409 FXYD6Q9H0Q3 95 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
MED28-204ENST00000506409 RGS5O15539 181 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 RLN1P04808 185 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 NQO2P16083 231 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 MAS1LP35410 378 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
MED28-204ENST00000506409 RPL5P46777 297 aaKnown RBP11.98□□□□□ -0.49
MED28-204ENST00000506409 INSL3P51460 131 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 TMBIM6P55061 237 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 TAS2R31P59538 309 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 RPL8P62917 257 aaKnown RBP11.98□□□□□ -0.49
MED28-204ENST00000506409 RNASE12Q5GAN4 147 aaKnown RBP11.98□□□□□ -0.49
MED28-204ENST00000506409 OR4A5Q8NH83 315 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 USMG5Q96IX5 58 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 BCL7BQ9BQE9 202 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 PLEKHA2Q9HB19 425 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 RANGRFQ9HD47 186 aaPredicted RBP11.98□□□□□ -0.49
MED28-204ENST00000506409 HRASLSQ9HDD0 168 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 BET1LQ9NYM9 111 aa11.98□□□□□ -0.49
MED28-204ENST00000506409 DNAH3Q8TD57 4116 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 ANKRD34BA5PLL1 514 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 GPR31O00270 319 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
MED28-204ENST00000506409 TPPPO94811 219 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 S1PR2O95136 353 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 PRH1P02810 166 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 DEFB121Q5J5C9 76 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 SLC25A42Q86VD7 318 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 OR52I2Q8NH67 350 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 C15orf40Q8WUR7 153 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 FYTTD1Q96QD9 318 aaKnown RBP11.97□□□□□ -0.49
MED28-204ENST00000506409 MIXL1Q9H2W2 232 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 COMMD9Q9P000 198 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
MED28-204ENST00000506409 DPPA5A6NC42 116 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 HMX3A6NHT5 357 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 M0QYG6 137 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 NOL3O60936 208 aaKnown RBP11.96□□□□□ -0.49
MED28-204ENST00000506409 SAP30O75446 220 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 RBMXL2O75526 392 aaKnown RBP11.96□□□□□ -0.49
MED28-204ENST00000506409 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.49
MED28-204ENST00000506409 ZNF735P0CB33 412 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 HLA-GP17693 338 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 ZP3P21754 424 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 F2RP25116 425 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 ECI1P42126 302 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 RHOGP84095 191 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 POU2AF1Q16633 256 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 VAX1Q5SQQ9 334 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 LPCAT3Q6P1A2 487 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 LAX1Q8IWV1 398 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 DMBX1Q8NFW5 382 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 DGCR14Q96DF8 476 aaKnown RBP11.96□□□□□ -0.49
MED28-204ENST00000506409 ABHD1Q96SE0 405 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 ZNF257Q9Y2Q1 563 aa11.96□□□□□ -0.49
MED28-204ENST00000506409 FAM223BA6NKX1 122 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 E7EUB6 86 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 CTDSP2O14595 271 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 IFNA6P05013 189 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 S100GP29377 79 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 ERVK-16P61578 105 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 ZNF45Q02386 682 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 PHLDA2Q53GA4 152 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 FAM223AQ8IWN6 122 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 FCAMRQ8WWV6 532 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 SLC2A9Q9NRM0 540 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 TMEM140Q9NV12 185 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 CCDC59Q9P031 241 aaKnown RBP11.95□□□□□ -0.5
MED28-204ENST00000506409 PEF1Q9UBV8 284 aaKnown RBP11.95□□□□□ -0.5
MED28-204ENST00000506409 MTFP1Q9UDX5 166 aa11.95□□□□□ -0.5
MED28-204ENST00000506409 TRBV9A0A0B4J1U6 114 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 A0A1B0GW64 132 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 UPK2O00526 184 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 MYOD1P15172 320 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 RPA2P15927 270 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms