RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ZP3P21754 424 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 CD40LGP29965 261 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 RANBP1P43487 201 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 CBX3Q13185 183 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 EXOSC2Q13868 293 aaKnown RBP9.95□□□□□ -0.82
DDX41-204ENST00000504807 HOGA1Q86XE5 327 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 TTC9CQ8N5M4 171 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 BEST4Q8NFU0 473 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 TCTEX1D2Q8WW35 142 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 TMEM68Q96MH6 324 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 FANCD2OSQ96PS1 177 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 DCUN1D5Q9BTE7 237 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 AUNIPQ9H7T9 357 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 KBTBD11O94819 623 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 NDUFB8O95169 186 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 FCGR2CP31995 323 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 ARL6IP1Q15041 203 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 SSX9Q7RTT3 188 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 ANKRD13BQ86YJ7 626 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 OR13F1Q8NGS4 319 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 ELOVL1Q9BW60 279 aa9.94□□□□□ -0.82
DDX41-204ENST00000504807 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.93□□□□□ -0.82
DDX41-204ENST00000504807 OR2A4O95047 310 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 PPYP01298 95 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 REG1AP05451 166 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 CTXN2P0C2S0 81 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 ZNF735P0CB33 412 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 RPS19P39019 145 aaKnown RBP9.93□□□□□ -0.82
DDX41-204ENST00000504807 C15orf32Q32M92 178 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 KCTD21Q4G0X4 260 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 ZNF818PQ6ZRF7 136 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 MMD2Q8IY49 270 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 SECTM1Q8WVN6 248 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 YIPF6Q96EC8 236 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 OR2A7Q96R45 310 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
DDX41-204ENST00000504807 WFDC10AQ9H1F0 79 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 Q9H521 79 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 RETNQ9HD89 108 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 ETV7Q9Y603 341 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 DNAH10Q8IVF4 4471 aa9.93□□□□□ -0.82
DDX41-204ENST00000504807 FAM223BA6NKX1 122 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 A8MZ25 164 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 SULT1C2O00338 296 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 MPPED1O15442 326 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 LSM3P62310 102 aaKnown RBP9.92□□□□□ -0.82
DDX41-204ENST00000504807 ATP5G2Q06055 141 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 RPEL1Q2QD12 228 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 FAM223AQ8IWN6 122 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 OR4S2Q8NH73 311 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 CACNG8Q8WXS5 425 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 FYTTD1Q96QD9 318 aaKnown RBP9.92□□□□□ -0.82
DDX41-204ENST00000504807 PRELID3BQ9Y3B1 194 aa9.92□□□□□ -0.82
DDX41-204ENST00000504807 MFSD2BA6NFX1 497 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 ZNF785A8K8V0 405 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 NPIPB5A8MRT5 1133 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 SCGNO76038 276 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 OR2C1O95371 312 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 CRYGCP07315 174 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 RPA2P15927 270 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
DDX41-204ENST00000504807 SCAND1P57086 179 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 FXYD4P59646 89 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 ARPC4P59998 168 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 KLK9Q2XQG4 91 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 TIMM50Q3ZCQ8 353 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 CD300EQ496F6 205 aaPredicted RBP9.91□□□□□ -0.82
DDX41-204ENST00000504807 OR4A47Q6IF82 309 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 ZNF66Q6ZN08 573 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 NECAP1Q8NC96 275 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 GATAD1Q8WUU5 269 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 SPIN2AQ99865 258 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 SPIN2BQ9BPZ2 258 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 SLC2A9Q9NRM0 540 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 SIGLEC8Q9NYZ4 499 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 KLK9Q9UKQ9 250 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 ANAPC10Q9UM13 185 aa9.91□□□□□ -0.82
DDX41-204ENST00000504807 MRPS7Q9Y2R9 242 aaKnown RBP9.91□□□□□ -0.82
DDX41-204ENST00000504807 SLC22A5O76082 557 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 S1PR2O95136 353 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 CD7P09564 240 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 CTRB1P17538 263 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 PSMB6P28072 239 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 GNRHRP30968 328 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 RFX2P48378 723 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 OR2B8PP59922 312 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 HAGHQ16775 308 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 CTRB2Q6GPI1 263 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
DDX41-204ENST00000504807 TMEM17Q86X19 198 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 SPAG16Q8N0X2 631 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 OR5AP2Q8NGF4 316 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 ZNF414Q96IQ9 312 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 SLC5A7Q9GZV3 580 aa9.9□□□□□ -0.82
DDX41-204ENST00000504807 FXYD6Q9H0Q3 95 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms