RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR5AP2Q8NGF4 316 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 OR13F1Q8NGS4 319 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 TMEM167AQ8TBQ9 72 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 KCTD12Q96CX2 325 aaKnown RBP9.13□□□□□ -0.95
MED28-203ENST00000503945 SLC25A38Q96DW6 304 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 SLC5A7Q9GZV3 580 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 SLC2A9Q9NRM0 540 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
MED28-203ENST00000503945 SIGLEC8Q9NYZ4 499 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 ZNF257Q9Y2Q1 563 aa9.13□□□□□ -0.95
MED28-203ENST00000503945 A0A087WXM4 84 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
MED28-203ENST00000503945 HMX3A6NHT5 357 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 TNFSF12O43508 249 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 RBMXL2O75526 392 aaKnown RBP9.12□□□□□ -0.95
MED28-203ENST00000503945 OR2J3O76001 311 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 KBTBD11O94819 623 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 PPYP01298 95 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 TRBV12-3P01733 135 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 FCER2P06734 321 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 CSN3P07498 182 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 DEFA4P12838 97 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 RPS19P39019 145 aaKnown RBP9.12□□□□□ -0.95
MED28-203ENST00000503945 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
MED28-203ENST00000503945 DEFA5Q01523 94 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 C15orf32Q32M92 178 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 SSX9Q7RTT3 188 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 SPAG16Q8N0X2 631 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 PUSL1Q8N0Z8 303 aaKnown RBP9.12□□□□□ -0.95
MED28-203ENST00000503945 Q8N1Y9 231 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 TSPAN14Q8NG11 270 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 OR4A5Q8NH83 315 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 BORCS5Q969J3 196 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 GPHA2Q96T91 129 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 HRASLSQ9HDD0 168 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 IFT46Q9NQC8 304 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 FBXL7Q9UJT9 491 aa9.12□□□□□ -0.95
MED28-203ENST00000503945 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 A8MZ25 164 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 SULT1C2O00338 296 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 HPRT1P00492 218 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 IL6RP08887 468 aaPredicted RBP9.11□□□□□ -0.95
MED28-203ENST00000503945 ZNF735P0CB33 412 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 IGHV4-30-4P0DP06 118 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 FXYD4P59646 89 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 LSM3P62310 102 aaKnown RBP9.11□□□□□ -0.95
MED28-203ENST00000503945 RPL8P62917 257 aaKnown RBP9.11□□□□□ -0.95
MED28-203ENST00000503945 ZNF45Q02386 682 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 CATR1Q13166 79 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 EXOSC2Q13868 293 aaKnown RBP9.11□□□□□ -0.95
MED28-203ENST00000503945 C10orf55Q5SWW7 151 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 LCN12Q6JVE5 192 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 DHRS11Q6UWP2 260 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 GTSCR1Q86UQ5 136 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 RCHY1Q96PM5 261 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 TUBA4BQ9H853 241 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 ADAM30Q9UKF2 790 aa9.11□□□□□ -0.95
MED28-203ENST00000503945 MEIS3P1A6NDR6 274 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 NPIPB5A8MRT5 1133 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 E7EUB6 86 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.956e-15■■■□□ 15.4
MED28-203ENST00000503945 GGCTO75223 188 aaKnown RBP9.1□□□□□ -0.95
MED28-203ENST00000503945 TNFAIP8O95379 198 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 CRYGCP07315 174 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 HIST1H1BP16401 226 aaKnown RBP9.1□□□□□ -0.95
MED28-203ENST00000503945 HLA-GP17693 338 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 PSMB6P28072 239 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 PRSS3P35030 304 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 RFX2P48378 723 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 TAS2R31P59538 309 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 HERV-K104P61576 105 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 FAM106AQ4KMX7 169 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 UBE2NLQ5JXB2 153 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 TMEM69Q5SWH9 247 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 OR4A47Q6IF82 309 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 Q8N402 240 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 SAMD12Q8N8I0 201 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 COMMD5Q9GZQ3 224 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 C19orf73Q9NVV2 129 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 BET1LQ9NYM9 111 aa9.1□□□□□ -0.95
MED28-203ENST00000503945 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 TEX22C9J3V5 150 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 BMPR1BO00238 502 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 OR2C1O95371 312 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 NQO2P16083 231 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 GNRHRP30968 328 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 MECP2P51608 486 aaKnown RBP9.09□□□□□ -0.95
MED28-203ENST00000503945 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
MED28-203ENST00000503945 AADACL3Q5VUY0 350 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 ZNF818PQ6ZRF7 136 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 GPHB5Q86YW7 130 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 CMTM1Q8IZ96 169 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 DMBX1Q8NFW5 382 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 OR2K2Q8NGT1 345 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 OR6F1Q8NGZ6 308 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 YIPF6Q96EC8 236 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 LYSTQ99698 3801 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms