RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 KLF17Q5JT82 389 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 XP32Q5T750 250 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 MINOS1Q5TGZ0 78 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 RUSC1-AS1Q66K80 236 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 PRSS57Q6UWY2 283 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CLEC9AQ6UXN8 241 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 ACOT7LQ6ZUV0 252 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 HAPLN4Q86UW8 402 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 THNSL2Q86YJ6 484 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CIARTQ8N365 385 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 WFDC11Q8NEX6 87 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 OSR1Q8TAX0 266 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 RPEQ96AT9 228 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 HARBI1Q96MB7 349 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 Q96MF0 132 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 REG4Q9BYZ8 158 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 ARL6Q9H0F7 186 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 RBKSQ9H477 322 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CYTL1Q9NRR1 136 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM14BQ9NUH8 114 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 FOXA2Q9Y261 457 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 HILPDAQ9Y5L2 63 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 SOX21Q9Y651 276 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 MINOS1-NBL1R4GNA1 71 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV3OR16-10A0A075B7F0 116 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TRAV20A0A0B4J274 112 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TRAV40A0A0B4J280 105 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV1-69DA0A0B4J2H0 117 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A0D9SG52 128 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1B0GW64 132 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 FAM24AA6NFZ4 105 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 CGB1A6NKQ9 187 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 B4DSR2 109 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 FAM90A26D6RGX4 464 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 E7EUB6 86 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 H3BP45 60 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 H7C2Y5 167 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 RGS13O14921 159 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 NPFFO15130 113 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 SHOXO15266 292 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TXNL1O43396 289 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 BCL2L11O43521 198 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 SYNGR2O43760 224 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 ATG12O94817 140 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 KBTBD11O94819 623 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 OR2F2O95006 317 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 HRASP01112 189 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV1-69P01742 117 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV4-38-2P0DP08 117 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 IAPPP10997 89 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 CD24P25063 80 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 RPL12P30050 165 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 MC5RP33032 325 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 VDAC2P45880 294 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 P2RY1P47900 373 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 SMCPP49901 116 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 RAB13P51153 203 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 ARHGDIBP52566 201 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 UBE2KP61086 200 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 ERVK-16P61578 105 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 SSBP2P81877 361 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 EWSR1Q01844 656 aaKnown RBP eCLIP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 NHLH2Q02577 135 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 PJVKQ0ZLH3 352 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 OR2F1Q13607 317 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 SSX2Q16385 188 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM249Q2WGJ8 235 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 MOB3BQ86TA1 216 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 ZNF429Q86V71 674 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 OR8H3Q8N146 312 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 Q8N6K4 173 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM252Q8N6L7 170 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 LINC01356Q8N9X3 169 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 OR4C13Q8NGP0 309 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM170AQ8WVE7 144 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 FLYWCH2Q96CP2 140 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 OR4C12Q96R67 309 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 MS4A7Q9GZW8 240 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 WFDC1Q9HC57 220 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 LYRM2Q9NU23 88 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 HIF1ANQ9NWT6 349 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 BET1LQ9NYM9 111 aa5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 TBL2Q9Y4P3 447 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-203ENST00000503464 ABCA1O95477 2261 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 PMS2P5A8MQ11 134 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 OOSP1A8MZH6 123 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 WRBO00258 174 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 SLC25A17O43808 307 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 GPR137BO60478 399 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 TSC22D2O75157 780 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 FSHBP01225 129 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 RLN2P04090 185 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 SNRNP70P08621 437 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 CD1BP29016 333 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 CEACAM3P40198 252 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms