RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 KIR2DL5BA0A0G2JN68 375 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 KIR2DL5BA0A0G2JPC4 375 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 C15orf65H3BRN8 121 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 SPINT2O43291 252 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 GCH1P30793 250 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 OPRK1P41145 380 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 CCL11P51671 97 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 FOXF2Q12947 444 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 KIR2DL5AQ8N109 375 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 LRRC29Q8WV35 223 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 R3HDM4Q96D70 268 aa16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 POLR3KQ9Y2Y1 108 aaPredicted RBP16.36■□□□□ 0.21
NKX2-1-202ENST00000498187 OR9G9P0C7N8 305 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 BMP5P22003 454 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 ZNF718Q3SXZ3 478 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 ARL6IP6Q8N6S5 226 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 ZNF114Q8NC26 417 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 C1orf162Q8NEQ5 155 aaPredicted RBP16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 PLPPR2Q96GM1 343 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 CBLN4Q9NTU7 201 aa16.35■□□□□ 0.21
NKX2-1-202ENST00000498187 NKX2-8O15522 239 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 RBFOX2O43251 390 aaKnown RBP eCLIP16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 CXorf1O96002 111 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 HTD2P86397 168 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 PDLIM3Q53GG5 364 aaPredicted RBP16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 FDCSPQ8NFU4 85 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 PGPEP1LA6NFU8 196 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 PCNX2A6NKB5 2137 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 ADH4P08319 380 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 GPR12P47775 334 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 SRSF6Q13247 344 aaKnown RBP16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 AARDQ4LEZ3 155 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 CMTM2Q8TAZ6 248 aa16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 PATZ1Q9HBE1 687 aaKnown RBP16.34■□□□□ 0.21
NKX2-1-202ENST00000498187 FAM90A9PA6NNJ1 464 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ZNF705FA8MVS1 300 aaPredicted RBP16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ZNF705DP0CH99 300 aaPredicted RBP16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ZNF705BP0CI00 300 aaPredicted RBP16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 STAG3L2P0CL84 134 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 STAG3L3P0CL85 134 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 PRDX2P32119 198 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 DUTP33316 252 aaKnown RBP16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ADMP35318 185 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 OR10G8Q8NGN5 311 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ZCCHC14Q8WYQ9 949 aaKnown RBP16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 RBM14Q96PK6 669 aaKnown RBP16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 HCFC1P51610 2035 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 TRAV9-1A0A075B6T8 112 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 IGHV2OR16-5A0A0B4J2B6 119 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 NUPR1O60356 82 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 FCGR3BO75015 233 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 PROP1O75360 226 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ARL14EPLP0DKL9 152 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 TIMP3P35625 211 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 PAFAH1B2P68402 229 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 TREML4Q6UXN2 200 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 ATG101Q9BSB4 218 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 TUBG2Q9NRH3 451 aa16.33■□□□□ 0.2
NKX2-1-202ENST00000498187 TRBV20OR9-2A0A075B6H5 130 aa16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 RAB4AP20338 218 aa16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 SELENOTP62341 195 aa16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 TRIP6Q15654 476 aaKnown RBP16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 MBNL2Q5VZF2 373 aaKnown RBP16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 SDSLQ96GA7 329 aa16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 TBX15Q96SF7 602 aa16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 GNG12Q9UBI6 72 aa16.32■□□□□ 0.2
NKX2-1-202ENST00000498187 IGHV1-18A0A0C4DH31 117 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 A0A1B0GUS0 222 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 AQP7O14520 342 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 IGLV1-44P01699 117 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 TPPP2P59282 170 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 TCF23Q7RTU1 214 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 OR2Z1Q8NG97 314 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 OR4A16Q8NH70 328 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 FAM234AQ9H0X4 552 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 TMEM106BQ9NUM4 274 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 EP300Q09472 2414 aaPredicted RBP16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 HPRT1P00492 218 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 TMPRSS3P57727 454 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 PRAMEF5Q5TYX0 476 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 TMEM204Q9BSN7 226 aa16.31■□□□□ 0.2
NKX2-1-202ENST00000498187 PRR33A8MZF0 331 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 M0QZK8 103 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 TDGF1P3P51864 188 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 ZNF90Q03938 601 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 OR52E5Q8NH55 327 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 OCC1Q8TAD7 63 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 HEYLQ9NQ87 328 aaPredicted RBP16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 IGKV1D-17A0A075B6S4 117 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 SCO2A0A1W2PP80 73 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 MORN2Q502X0 79 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 MRPL52Q86TS9 123 aaKnown RBP16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 Q8TCH9 128 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 MGST2Q99735 147 aa16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 OPN3Q9H1Y3 402 aaPredicted RBP16.3■□□□□ 0.2
NKX2-1-202ENST00000498187 M0R1X1 148 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 VKORC1L1Q8N0U8 176 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 SARAFQ96BY9 339 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms