RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 TCF19Q9Y242 345 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 STRAPQ9Y3F4 350 aaKnown RBP14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 IGHV1-3A0A0C4DH29 117 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 IGHV2-70DA0A0C4DH43 119 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 A0A1W2PRD5 423 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 A0A1W2PRF3 423 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 A0A1W2PRM7 423 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 A8MXK9 166 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 PRTN3P24158 256 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 HOXA1P49639 335 aaPredicted RBP14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 HCP5Q6MZN7 132 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 CLEC2AQ6UVW9 174 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 TMEM14EPQ6UXP3 125 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 LILRB2Q8N423 598 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 KIR3DL3Q8N743 410 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 OR52E5Q8NH55 327 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 RNF141Q8WVD5 230 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 LPAR2Q9HBW0 351 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 AUP1Q9Y679 476 aa14.4□□□□□ -0.1
CHRNA4-206ENST00000498043 HBG1P69891 147 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 HBG2P69892 147 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 PAX2Q02962 417 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 LDLRAD2Q5SZI1 272 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 MOB3BQ86TA1 216 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 OR11H6Q8NGC7 330 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 C10orf105Q8TEF2 133 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 MS4A7Q9GZW8 240 aaPredicted RBP14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 OR51B2Q9Y5P1 312 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 INSIG2Q9Y5U4 225 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 CSMD2Q7Z408 3487 aa14.39□□□□□ -0.11
CHRNA4-206ENST00000498043 UPK2O00526 184 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 KBTBD11O94819 623 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 OPN1MWP04001 364 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 OPN1MW2P0DN77 364 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 OPN1MW3P0DN78 364 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 MC5RP33032 325 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 PDLIM3Q53GG5 364 aaPredicted RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 CLCC1Q96S66 551 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 AIFM2Q9BRQ8 373 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 BARX1Q9HBU1 254 aaPredicted RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 BET1LQ9NYM9 111 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 PLA2G2EQ9NZK7 142 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 PRNDQ9UKY0 176 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 RFNGQ9Y644 331 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 TENM4Q6N022 2769 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 ZNF705EA8MWA4 302 aaPredicted RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 FGF16O43320 207 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 DFFBO76075 338 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 IL6RP08887 468 aaPredicted RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 FAM157CP0CG43 387 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 SPP1P10451 314 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 S100A1P23297 94 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 RUNX1Q01196 453 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 SLC38A11Q08AI6 406 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 PUSL1Q8N0Z8 303 aaKnown RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 STPG2Q8N412 459 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 TSNAXQ99598 290 aaKnown RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 HINT2Q9BX68 163 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 HEYLQ9NQ87 328 aaPredicted RBP14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 PFDN2Q9UHV9 154 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 KPTNQ9Y664 436 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 CELSR2Q9HCU4 2923 aa14.38□□□□□ -0.11
CHRNA4-206ENST00000498043 IGHV4-61A0A0C4DH41 118 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 ODF3BA8MYP8 253 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 LY6LH3BQJ8 138 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 ATP6V0CP27449 155 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 HTR1DP28221 377 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 SLC25A24Q6NUK1 477 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 RITA1Q96K30 269 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 SIRPDQ9H106 197 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 IGHV4-30-2A0A087WSY4 118 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 A0A1W2PPI3 338 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 C15orf62A8K5M9 175 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 FAM157AC9JC47 383 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 IGLV2-23P01705 113 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 SEC11BP0C7V7 166 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 HOXB4P17483 251 aaPredicted RBP14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 VDAC2P45880 294 aaPredicted RBP14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 HSPE1P61604 102 aaKnown RBP14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 TPTE2P1Q5T6R2 138 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 LHFPL4Q7Z7J7 247 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 HIPK2Q9H2X6 1198 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 HILPDAQ9Y5L2 63 aa14.37□□□□□ -0.11
CHRNA4-206ENST00000498043 RNASEK-C17orf49H0YIS7 233 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 NDUFS8O00217 210 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 FGF2P09038 288 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 PAX6P26367 422 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 SULT1A2P50226 295 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 ZNF787Q6DD87 383 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 LRRC20Q8TCA0 184 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 MARVELD3Q96A59 401 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 CACFD1Q9UGQ2 172 aa14.36□□□□□ -0.11
CHRNA4-206ENST00000498043 UBE2L5PA0A1B0GUS4 154 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 VWC2LB2RUY7 222 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 SLC25A17O43808 307 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 FOXH1O75593 365 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 IFNA10P01566 189 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 IFNA5P01569 189 aa14.35□□□□□ -0.11
CHRNA4-206ENST00000498043 TMEM182Q6ZP80 229 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms