RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 UMODL1-AS1Q8N2C9 162 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 RPP25LQ8N5L8 163 aaKnown RBP0.48□□□□□ -2.33
SMC4-227ENST00000497984 UBL4BQ8N7F7 174 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 OR2T27Q8NH04 317 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 HAVCR2Q8TDQ0 301 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 PACRGQ96M98 296 aaPredicted RBP0.48□□□□□ -2.33
SMC4-227ENST00000497984 NDEL1Q9GZM8 345 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 CHST6Q9GZX3 395 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 HES4Q9HCC6 221 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 NAT8Q9UHE5 227 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 RAD50Q92878 1312 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 IGKV2D-26A0A0A0MRZ7 120 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 ERICH2A1L162 156 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 MEIS3P1A6NDR6 274 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 F5H768 121 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 NEMFO60524 1076 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 NPPAP01160 153 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 REG1AP05451 166 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 TRGC1P0CF51 173 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 UGT2B7P16662 529 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 PSMB6P28072 239 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 CD40LGP29965 261 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 AKR1C1Q04828 323 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 ELOBQ15370 118 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 C1orf194Q5T5A4 169 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 CLEC6AQ6EIG7 209 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 OR7G1Q8NGA0 311 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 DNAJB3Q8WWF6 145 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 ACOT12Q8WYK0 555 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 TESCQ96BS2 214 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 SMIM19Q96E16 107 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 DHRS9Q9BPW9 319 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 CXorf21Q9HAI6 301 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 SPACA1Q9HBV2 294 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 ANAPC10Q9UM13 185 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 PRELID1Q9Y255 219 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 TIMM22Q9Y584 194 aa0.47□□□□□ -2.33
SMC4-227ENST00000497984 KIF24Q5T7B8 1368 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 KIF15Q9NS87 1388 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 DSTQ03001 7570 aaKnown RBP0.46□□□□□ -2.34
SMC4-227ENST00000497984 A0A1B0GW54 56 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 FAM25EA8MYX2 175 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 LST1O00453 97 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 COCHO43405 550 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 HCRTO43612 131 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 CCL1P22362 96 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 EVX1P49640 407 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 UBE2G2P60604 165 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 HIST1H4AP62805 103 aaKnown RBP0.46□□□□□ -2.34
SMC4-227ENST00000497984 TNFAIP6P98066 277 aaPredicted RBP0.46□□□□□ -2.34
SMC4-227ENST00000497984 MGAT3Q09327 533 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 TNFAIP8L3Q5GJ75 292 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 C9orf64Q5T6V5 341 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 SSX8Q7RTT4 187 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 TMEM86AQ8N2M4 240 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 ZNF514Q96K75 400 aaPredicted RBP0.46□□□□□ -2.34
SMC4-227ENST00000497984 ODF3Q96PU9 254 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 DCUN1D5Q9BTE7 237 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 OR8D2Q9GZM6 311 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 CHMP4BQ9H444 224 aaKnown RBP0.46□□□□□ -2.34
SMC4-227ENST00000497984 CFAP45Q9UL16 551 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 C22orf24Q9Y442 160 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 LHFPL6Q9Y693 200 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 DLG5Q8TDM6 1919 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 ROS1P08922 2347 aa0.46□□□□□ -2.34
SMC4-227ENST00000497984 TONSLQ96HA7 1378 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 LEPROTO15243 131 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 MSMBP08118 114 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 MSNP26038 577 aaKnown RBP0.45□□□□□ -2.34
SMC4-227ENST00000497984 HLA-DMBP28068 263 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 DDTP30046 118 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 PPP1R1AQ13522 171 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 RPS19BP1Q86WX3 136 aaKnown RBP0.45□□□□□ -2.34
SMC4-227ENST00000497984 ZNF439Q8NDP4 499 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 OR5B17Q8NGF7 314 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 KCTD7Q96MP8 289 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 C7orf50Q9BRJ6 194 aaKnown RBP0.45□□□□□ -2.34
SMC4-227ENST00000497984 UPF3BQ9BZI7 483 aaKnown RBP0.45□□□□□ -2.34
SMC4-227ENST00000497984 XAGE1AQ9HD64 81 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 GPR84Q9NQS5 396 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 IMP3Q9NV31 184 aaKnown RBP0.45□□□□□ -2.34
SMC4-227ENST00000497984 GMEB1Q9Y692 573 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 SETD5Q9C0A6 1442 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 SCN9AQ15858 1988 aa0.45□□□□□ -2.34
SMC4-227ENST00000497984 DIDO1Q9BTC0 2240 aaKnown RBP0.44□□□□□ -2.34
SMC4-227ENST00000497984 I3L521 148 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 CALUO43852 315 aaPredicted RBP0.44□□□□□ -2.34
SMC4-227ENST00000497984 CDC34P49427 236 aaPredicted RBP0.44□□□□□ -2.34
SMC4-227ENST00000497984 RAB13P51153 203 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 C10orf55Q5SWW7 151 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 FAM78BQ5VT40 261 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 SLC22A24Q8N4F4 322 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 ZNF676Q8N7Q3 588 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 TMEM161BQ8NDZ6 487 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 OR1M1Q8NGA1 313 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 OR8B3Q8NGG8 313 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 JOSD2Q8TAC2 188 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 REG4Q9BYZ8 158 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 SPANXB1Q9NS25 103 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms