RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ZFAND1Q8TCF1 268 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 MARCH1Q8TCQ1 289 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 C4orf3Q8WVX3 66 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 CLCC1Q96S66 551 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 C14orf166Q9Y224 244 aaKnown RBP11.97□□□□□ -0.49
NUP50-219ENST00000497960 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 CENPXA8MT69 81 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 FCN1O00602 326 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 FCGR3BO75015 233 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 CRYZL1O95825 349 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 IGLV1-40P01703 118 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 LGALS7P47929 136 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 RPL30P62888 115 aaKnown RBP11.96□□□□□ -0.49
NUP50-219ENST00000497960 NDPQ00604 133 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 EIF4EBP1Q13541 118 aaPredicted RBP11.96□□□□□ -0.49
NUP50-219ENST00000497960 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 POC5Q8NA72 575 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 MINDY2Q8NBR6 621 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 OR4S2Q8NH73 311 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 DDB2Q92466 427 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 ZNF486Q96H40 463 aaPredicted RBP11.96□□□□□ -0.49
NUP50-219ENST00000497960 UBE2E2Q96LR5 201 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 HARBI1Q96MB7 349 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 C7orf50Q9BRJ6 194 aaKnown RBP11.96□□□□□ -0.49
NUP50-219ENST00000497960 KLK15Q9H2R5 256 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 SLC2A9Q9NRM0 540 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
NUP50-219ENST00000497960 VSIG4Q9Y279 399 aa11.96□□□□□ -0.49
NUP50-219ENST00000497960 A0A1W2PN81 502 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 SHOXO15266 292 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 SLC25A17O43808 307 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 PI3P19957 117 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 CHRNA7P36544 502 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 RAB9AP51151 201 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
NUP50-219ENST00000497960 SURF2Q15527 256 aaPredicted RBP11.95□□□□□ -0.5
NUP50-219ENST00000497960 PPP1R27Q86WC6 154 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 ZNF491Q8N8L2 437 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 CCDC71LQ8N9Z2 235 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 OR5M8Q8NGP6 311 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 MYOZ3Q8TDC0 251 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 MRGPRFQ96AM1 343 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 COPZ2Q9P299 210 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 FBXO7Q9Y3I1 522 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 NUBP2Q9Y5Y2 271 aa11.95□□□□□ -0.5
NUP50-219ENST00000497960 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
NUP50-219ENST00000497960 UPK1BO75841 260 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 CA2P00918 260 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 CTSDP07339 412 aaPredicted RBP11.94□□□□□ -0.5
NUP50-219ENST00000497960 HOXD3P31249 432 aaPredicted RBP11.94□□□□□ -0.5
NUP50-219ENST00000497960 PIGPP57054 158 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 RND3P61587 244 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 UNQ5815/PRO19632Q6UWF5 114 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 SPAG16Q8N0X2 631 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 SCGB3A2Q96PL1 93 aa11.94□□□□□ -0.5
NUP50-219ENST00000497960 ZMAT5Q9UDW3 170 aaKnown RBP11.94□□□□□ -0.5
NUP50-219ENST00000497960 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
NUP50-219ENST00000497960 LYRM1O43325 122 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 CNIH1O95406 144 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
NUP50-219ENST00000497960 EGFEM1PQ0D2K5 195 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 KIAA0141Q14154 515 aaPredicted RBP11.93□□□□□ -0.5
NUP50-219ENST00000497960 FXYD3Q14802 87 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 RBMS2Q15434 407 aaKnown RBP11.93□□□□□ -0.5
NUP50-219ENST00000497960 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 TMEM177Q53S58 311 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 ARPC1AQ92747 370 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
NUP50-219ENST00000497960 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
NUP50-219ENST00000497960 RAMP3O60896 148 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 OR8U8P0C7N1 319 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 F2RP25116 425 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 CCR6P51684 374 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 KRTAP10-11P60412 298 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 RUNX1Q01196 453 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 FHL3Q13643 280 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 VMA21Q3ZAQ7 101 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 GRPEL2Q8TAA5 225 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 OSR1Q8TAX0 266 aaPredicted RBP11.92□□□□□ -0.5
NUP50-219ENST00000497960 CD300LFQ8TDQ1 290 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 TSC22D3Q99576 134 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 SLC25A21Q9BQT8 299 aaPredicted RBP11.92□□□□□ -0.5
NUP50-219ENST00000497960 C5orf66Q9H5L9 145 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 TPSG1Q9NRR2 321 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 GPR132Q9UNW8 380 aa11.92□□□□□ -0.5
NUP50-219ENST00000497960 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
NUP50-219ENST00000497960 I3L521 148 aa11.91□□□□□ -0.5
NUP50-219ENST00000497960 RBFOX2O43251 390 aaKnown RBP eCLIP11.91□□□□□ -0.5
NUP50-219ENST00000497960 SOX15O60248 233 aa11.91□□□□□ -0.5
NUP50-219ENST00000497960 S1PR2O95136 353 aa11.91□□□□□ -0.5
NUP50-219ENST00000497960 GNB1P62873 340 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms