RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ADRB3P13945 408 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 IL9P15248 144 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 CASP1P29466 404 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 NUDT1P36639 197 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 HERVK_113P63121 156 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
BRCA1-224ENST00000497488 HES3Q5TGS1 186 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 TCF23Q7RTU1 214 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 STX19Q8N4C7 294 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 ZDHHC22Q8N966 263 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 LY6G5BQ8NDX9 201 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 LHFPL5Q8TAF8 219 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 GALMQ96C23 342 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 OR2A5Q96R48 311 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 WFDC1Q9HC57 220 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 PXMP4Q9Y6I8 212 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 HCFC1P51610 2035 aa4.22□□□□□ -1.73
BRCA1-224ENST00000497488 PRRC2BQ5JSZ5 2229 aaKnown RBP4.22□□□□□ -1.73
BRCA1-224ENST00000497488 IGHV7-4-1A0A0J9YVY3 117 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 hADV38S2A0JD32 116 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 C4orf51C9J302 202 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 SERPINA7P05543 415 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 ORM2P19652 201 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF83P51522 516 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 GABARAPL2P60520 117 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 ORMDL3Q8N138 153 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 C15orf56Q8N910 161 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 FAM210BQ96KR6 192 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 DERL3Q96Q80 235 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 TBX5Q99593 518 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 SS18L2Q9UHA2 77 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 RSL24D1Q9UHA3 163 aaKnown RBP4.21□□□□□ -1.74
BRCA1-224ENST00000497488 FIS1Q9Y3D6 152 aa4.21□□□□□ -1.74
BRCA1-224ENST00000497488 C5orf42Q9H799 3197 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 TMED7-TICAM2A0A0A6YYA0 188 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 B4DEV8 164 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 H3BSA7 217 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 BPY2O14599 106 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 MAS1P04201 325 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF688P0C7X2 276 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 TLX1NBP0CAT3 122 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 CXCL8P10145 99 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 ATP5G2Q06055 141 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 C15orf32Q32M92 178 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 FAM78AQ5JUQ0 283 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 EBLN2Q6P2I7 272 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-224ENST00000497488 TBPL2Q6SJ96 375 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 OR4K5Q8NGD3 323 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 REEP6Q96HR9 211 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 AIF1LQ9BQI0 150 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 THTPAQ9BU02 230 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 MED28Q9H204 178 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 HMG20AQ9NP66 347 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 CISHQ9NSE2 258 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 UQCC1Q9NVA1 299 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 TMEM56-RWDD3S4R434 201 aa4.2□□□□□ -1.74
BRCA1-224ENST00000497488 A0A087WYN8 130 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 IGHV1-45A0A0A0MS14 117 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 TRAV26-2A0A0B4J265 109 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 MFSD11O43934 449 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 SRSF10O75494 262 aaKnown RBP4.19□□□□□ -1.74
BRCA1-224ENST00000497488 DEDDO75618 318 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 SCO1O75880 301 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 LY6G6DO95868 133 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 LTAP01374 205 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 APCSP02743 223 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 CRABP1P29762 137 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 LINC00313P59037 77 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 SNRPD2P62316 118 aaKnown RBP4.19□□□□□ -1.74
BRCA1-224ENST00000497488 RHOBP62745 196 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 RBX1P62877 108 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 TEX30Q5JUR7 227 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 NANOGP8Q6NSW7 305 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 TMPPEQ6ZT21 453 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 ZNF720Q7Z2F6 126 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 DPPA2Q7Z7J5 298 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 DAZ4Q86SG3 579 aaKnown RBP4.19□□□□□ -1.74
BRCA1-224ENST00000497488 PCP2Q8IVA1 136 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 OR8B12Q8NGG6 310 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 OR2T27Q8NH04 317 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 BORCS5Q969J3 196 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 EXOSC8Q96B26 276 aaKnown RBP4.19□□□□□ -1.74
BRCA1-224ENST00000497488 NANOGQ9H9S0 305 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 DAZ1Q9NQZ3 744 aaKnown RBP4.19□□□□□ -1.74
BRCA1-224ENST00000497488 RWDD2AQ9UIY3 292 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 ANAPC10Q9UM13 185 aa4.19□□□□□ -1.74
BRCA1-224ENST00000497488 OR4C45A6NMZ5 311 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 ARPC5O15511 151 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 POP7O75817 140 aaKnown RBP4.18□□□□□ -1.74
BRCA1-224ENST00000497488 GPR75O95800 540 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 IGLV3-25P01717 112 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 C1QBP02746 253 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 PPBPP02775 128 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 CNTFRP26992 372 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 S100GP29377 79 aa4.18□□□□□ -1.74
BRCA1-224ENST00000497488 CMC4P56277 68 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-224ENST00000497488 FLI1Q01543 452 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms