RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ZNF846Q147U1 533 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ATXN7L3Q14CW9 347 aaPredicted RBP5.03□□□□□ -1.6
VIM-207ENST00000495528 ARL6IP1Q15041 203 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 SSX2Q16385 188 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 PHLDA2Q53GA4 152 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 TCTEX1D4Q5JR98 221 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 KRBOX4Q5JUW0 171 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 PYHIN1Q6K0P9 492 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 BAIAP2L2Q6UXY1 529 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 LINC00299Q6ZSB3 139 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 TRAPPC6BQ86SZ2 158 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 GVQW1Q8N7I0 195 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 OR5AU1Q8NGC0 362 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 C15orf40Q8WUR7 153 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 MAFIPQ8WZ33 124 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 MALSU1Q96EH3 234 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ABCB10Q9NRK6 738 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 KLK11Q9UBX7 282 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 ZNF230Q9UIE0 474 aaPredicted RBP5.03□□□□□ -1.6
VIM-207ENST00000495528 KIF25Q9UIL4 384 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 TRAPPC2LQ9UL33 140 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 V9GYH0 126 aa5.03□□□□□ -1.6
VIM-207ENST00000495528 DSCAML1Q8TD84 2053 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 MEIKINA0A087WXM9 373 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 LINC00854A0A1B0GVQ3 168 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 TCRBV4S1A1TA0A5B7 111 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 TMEM30CPA0ZSE6 113 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 FUOMA2VDF0 154 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 SERPINE3A8MV23 424 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 C17orf98A8MV24 154 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 GABARAPH6UMI1 98 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 LANCL1O43813 399 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 ORC5O43913 435 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 PTBP1P26599 531 aaKnown RBP eCLIP5.02□□□□□ -1.61
VIM-207ENST00000495528 VDAC2P45880 294 aaPredicted RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 DLX6P56179 175 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 ZNF79Q15937 498 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 ZNF876PQ49A33 203 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 ZNF497Q6ZNH5 498 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 Q8N402 240 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 GDPD1Q8N9F7 314 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 ZNF565Q8N9K5 539 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 ZBTB8BQ8NAP8 495 aaPredicted RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 RFESDQ8TAC1 157 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 UBALD1Q8TB05 177 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 MRPL30Q8TCC3 161 aaKnown RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 GPX8Q8TED1 209 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 COQ2Q96H96 371 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 SDHCQ99643 169 aaPredicted RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 RABL2AQ9UBK7 228 aaPredicted RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 PITPNC1Q9UKF7 332 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 RABL2BQ9UNT1 228 aa5.02□□□□□ -1.61
VIM-207ENST00000495528 TBL2Q9Y4P3 447 aaKnown RBP5.02□□□□□ -1.61
VIM-207ENST00000495528 IGKV1D-8A0A087WSZ0 117 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 A0A1W2PRV1 198 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 ODAMA1E959 279 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 ODF3BA8MYP8 253 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 SULT1C2O00338 296 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 CTDSPLO15194 276 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 GSTZ1O43708 216 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 CA11O75493 328 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 NAPSAO96009 420 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 PMP2P02689 132 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 GSTT2P0CG29 244 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 GSTT2BP0CG30 244 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 GZMHP20718 246 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 ERP29P30040 261 aaKnown RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 CBX5P45973 191 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 KCNJ3P48549 501 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 INPP1P49441 399 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 DYNLT3P51808 116 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 CRIP2P52943 208 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 EGFEM1PQ0D2K5 195 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 KIAA1644Q3SXP7 199 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 RSBN1Q5VWQ0 802 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 ZNF57Q68EA5 555 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 OR52W1Q6IF63 320 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 FAM53AQ6NSI3 398 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 C10orf99Q6UWK7 81 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 CENPVQ7Z7K6 275 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 OR11H6Q8NGC7 330 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 OR13D1Q8NGV5 346 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 MRGPRDQ8TDS7 321 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 ARL11Q969Q4 196 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 DUX3Q96PT4 197 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 B9D2Q9BPU9 175 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 SRRQ9GZT4 340 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 RIMS4Q9H426 269 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 TAF9BQ9HBM6 251 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 Q9N2K0 584 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 IFT46Q9NQC8 304 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 KCNIP1Q9NZI2 227 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 MTFP1Q9UDX5 166 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 HILPDAQ9Y5L2 63 aa5.01□□□□□ -1.61
VIM-207ENST00000495528 TSSC4Q9Y5U2 329 aaPredicted RBP5.01□□□□□ -1.61
VIM-207ENST00000495528 TRGV10A0A0A0MS01 117 aa5□□□□□ -1.61
VIM-207ENST00000495528 hADV38S2A0JD32 116 aa5□□□□□ -1.61
VIM-207ENST00000495528 TRDCB7Z8K6 153 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms