RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 DUSP13Q9UII6 198 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 TRAV17A0A0B4J275 112 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 TRGV8A0A0C4DH27 118 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 ITGB1BP1O14713 200 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 RRHO14718 337 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 GFRA3O60609 400 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 CRYAAP02489 173 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 STAG3L2P0CL84 134 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 STAG3L3P0CL85 134 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 EGR1P18146 543 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 CHRNA7P36544 502 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 ATP5G3P48201 142 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 LOXL3P58215 753 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 REC114Q7Z4M0 266 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 OR5T1Q8NG75 326 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 RAB9BQ9NP90 201 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
UBXN11-215ENST00000494942 PXMP4Q9Y6I8 212 aa12.32□□□□□ -0.44
UBXN11-215ENST00000494942 CELSR3Q9NYQ7 3312 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 AHRRA9YTQ3 701 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 PAX1P15863 534 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 RAB7AP51149 207 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 Q8TCH9 128 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 TMEM18Q96B42 140 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 MGST2Q99735 147 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 GGTLC1Q9BX51 225 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 PATZ1Q9HBE1 687 aaKnown RBP12.31□□□□□ -0.44
UBXN11-215ENST00000494942 TMEM140Q9NV12 185 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 A0A087X0M5 115 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 A0A1B0GX30 115 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 MKRN2OSH3BPM6 223 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 ARL14EPLP0DKL9 152 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 RPL39P5Q59GN2 51 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 FAM78BQ5VT40 261 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 BHLHA15Q7RTS1 189 aaPredicted RBP12.31□□□□□ -0.44
UBXN11-215ENST00000494942 TMEM144Q7Z5S9 345 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 RHOVQ96L33 236 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 IFI27L2Q9H2X8 130 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 NCOR1P1Q9H4R4 102 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 NPVFQ9HCQ7 196 aa12.31□□□□□ -0.44
UBXN11-215ENST00000494942 NKX2-8O15522 239 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 IL3RAP26951 378 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 CCKARP32238 428 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 CNN1P51911 297 aaKnown RBP12.3□□□□□ -0.44
UBXN11-215ENST00000494942 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 SFRP2Q96HF1 295 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 FAM234AQ9H0X4 552 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 FRYQ5TBA9 3013 aa12.3□□□□□ -0.44
UBXN11-215ENST00000494942 ZNF134P52741 427 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 GCSAMQ8N6F7 178 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-215ENST00000494942 DDB2Q92466 427 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-215ENST00000494942 TMEM204Q9BSN7 226 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 PRO1933Q9H354 126 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 LSM4Q9Y4Z0 139 aaKnown RBP12.29□□□□□ -0.44
UBXN11-215ENST00000494942 CEP250Q9BV73 2442 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 TNFSF13O75888 250 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 RPL15P61313 204 aaKnown RBP12.29□□□□□ -0.44
UBXN11-215ENST00000494942 TRIP6Q15654 476 aaKnown RBP12.29□□□□□ -0.44
UBXN11-215ENST00000494942 MIC13Q5XKP0 118 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 STARD4Q96DR4 205 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 MEGF10Q96KG7 1140 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 DERL1Q9BUN8 251 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 CALYQ9NYX4 217 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 SLC25A15Q9Y619 301 aa12.29□□□□□ -0.44
UBXN11-215ENST00000494942 A0A0U1RQK1 487 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 MDFIC2A0A1B0GVS7 189 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 ZNF320A2RRD8 509 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 CGAP01215 116 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 RAB31Q13636 194 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 SDSLQ96GA7 329 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 OPN3Q9H1Y3 402 aaPredicted RBP12.28□□□□□ -0.44
UBXN11-215ENST00000494942 TRAPPC1Q9Y5R8 145 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 HCFC1P51610 2035 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 MT-CO2P00403 227 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 TEPPQ6URK8 271 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
UBXN11-215ENST00000494942 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
UBXN11-215ENST00000494942 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 PCNX2A6NKB5 2137 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 C1QTNF9P0C862 333 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 CGB3P0DN86 165 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 CGB7P0DN87 165 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 BMP5P22003 454 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 RHOBP62745 196 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 SGMS2Q8NHU3 365 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 OR2V2Q96R30 315 aa12.27□□□□□ -0.44
UBXN11-215ENST00000494942 CACNA1GO43497 2377 aa12.27□□□□□ -0.45
UBXN11-215ENST00000494942 IGHV3OR15-7A0A075B7D8 119 aa12.27□□□□□ -0.45
UBXN11-215ENST00000494942 LHBP01229 141 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms