RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 EXTL2Q9UBQ6 330 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 DPPA5A6NC42 116 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 OVOL1O14753 267 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 RGS5O15539 181 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 TPPPO94811 219 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 APELAP0DMC3 54 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 TAS2R31P59538 309 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 MRGPRG-AS1Q2M3A8 158 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 SSX9Q7RTT3 188 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 PUSL1Q8N0Z8 303 aaKnown RBP13.65□□□□□ -0.22
HDAC4-211ENST00000494800 OR51H1Q8NH63 302 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 TMEM167AQ8TBQ9 72 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 RANGRFQ9HD47 186 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-211ENST00000494800 HRASLSQ9HDD0 168 aa13.65□□□□□ -0.22
HDAC4-211ENST00000494800 IGHV4OR15-8A0A075B7B6 117 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 A0A087WW49 117 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 NQO2P16083 231 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 GNRHRP30968 328 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 RPL27AP46776 148 aaKnown RBP13.64□□□□□ -0.23
HDAC4-211ENST00000494800 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
HDAC4-211ENST00000494800 TMBIM6P55061 237 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 RPL8P62917 257 aaKnown RBP13.64□□□□□ -0.23
HDAC4-211ENST00000494800 DEFB121Q5J5C9 76 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 DCUN1D4Q92564 292 aa13.64□□□□□ -0.23
HDAC4-211ENST00000494800 GPR31O00270 319 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 RLN1P04808 185 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 IFNA6P05013 189 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 ZP3P21754 424 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 SLURP1P55000 103 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 BRWD1-AS2P59051 145 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 ERVK-16P61578 105 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 OR4A47Q6IF82 309 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 ZNF429Q86V71 674 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 ADAD2Q8NCV1 583 aaKnown RBP13.63□□□□□ -0.23
HDAC4-211ENST00000494800 DMBX1Q8NFW5 382 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 BET1LQ9NYM9 111 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 COMMD9Q9P000 198 aa13.63□□□□□ -0.23
HDAC4-211ENST00000494800 FAM223BA6NKX1 122 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 DHFRP00374 187 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 SPCS2Q15005 226 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 TTC9CQ8N5M4 171 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 FCAMRQ8WWV6 532 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 DLX4Q92988 240 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-211ENST00000494800 FYTTD1Q96QD9 318 aaKnown RBP13.62□□□□□ -0.23
HDAC4-211ENST00000494800 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 ZNF257Q9Y2Q1 563 aa13.62□□□□□ -0.23
HDAC4-211ENST00000494800 WI2-2373I1.2A0A1W2PRP0 233 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 K7EIL1 84 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 SAP30O75446 220 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 PGLYRP1O75594 196 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-211ENST00000494800 HLA-GP17693 338 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 TBPP20226 339 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 F2RP25116 425 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 ECI1P42126 302 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 RNASE12Q5GAN4 147 aaKnown RBP13.61□□□□□ -0.23
HDAC4-211ENST00000494800 RNASE10Q5GAN6 216 aaKnown RBP13.61□□□□□ -0.23
HDAC4-211ENST00000494800 VAX1Q5SQQ9 334 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 C10orf55Q5SWW7 151 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 ELOVL1Q9BW60 279 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 COMMD5Q9GZQ3 224 aa13.61□□□□□ -0.23
HDAC4-211ENST00000494800 CCDC59Q9P031 241 aaKnown RBP13.61□□□□□ -0.23
HDAC4-211ENST00000494800 ANKRD34BA5PLL1 514 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 PRKDCP78527 4128 aaKnown RBP13.6□□□□□ -0.23
HDAC4-211ENST00000494800 MRPS10P82664 201 aaKnown RBP13.6□□□□□ -0.23
HDAC4-211ENST00000494800 RHOGP84095 191 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 ATP5G2Q06055 141 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 POU2AF1Q16633 256 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 TATDN3Q17R31 274 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 FAM209BQ5JX69 171 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 SLC38A6Q8IZM9 456 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 NECAP1Q8NC96 275 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
HDAC4-211ENST00000494800 OR4C12Q96R67 309 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 SLC2A9Q9NRM0 540 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 TMEM140Q9NV12 185 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 RABL2AQ9UBK7 228 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-211ENST00000494800 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
HDAC4-211ENST00000494800 SCOCQ9UIL1 159 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 RABL2BQ9UNT1 228 aa13.6□□□□□ -0.23
HDAC4-211ENST00000494800 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 S1PR2O95136 353 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 FGF2P09038 288 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 ZNF735P0CB33 412 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 UCP3P55916 312 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 ZNF343Q6P1L6 599 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 ARRDC1Q8N5I2 433 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 OR52I2Q8NH67 350 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 KLK11Q9UBX7 282 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 MTFP1Q9UDX5 166 aa13.59□□□□□ -0.23
HDAC4-211ENST00000494800 ZNF256Q9Y2P7 627 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-211ENST00000494800 HMX3A6NHT5 357 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 MARCH11A6NNE9 402 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 TEX22C9J3V5 150 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 M0QYG6 137 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 UPK2O00526 184 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms