RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 AKIP1Q9NQ31 210 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 DIABLOQ9NR28 239 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 MRPS7Q9Y2R9 242 aaKnown RBP7.33□□□□□ -1.24
MSH5-218ENST00000494646 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
MSH5-218ENST00000494646 HYDINQ4G0P3 5121 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 OR2A4O95047 310 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 BRI3O95415 125 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 CSN3P07498 182 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 IL6RP08887 468 aaPredicted RBP7.32□□□□□ -1.24
MSH5-218ENST00000494646 FXYD4P59646 89 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 RHOGP84095 191 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 EIF4EBP1Q13541 118 aaPredicted RBP7.32□□□□□ -1.24
MSH5-218ENST00000494646 RPEL1Q2QD12 228 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 HOGA1Q86XE5 327 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 TTC9CQ8N5M4 171 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 SNAPC3Q92966 411 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 RCHY1Q96PM5 261 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 OR2A7Q96R45 310 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 HSD17B10Q99714 261 aaKnown RBP7.32□□□□□ -1.24
MSH5-218ENST00000494646 SPIN2AQ99865 258 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 SPIN2BQ9BPZ2 258 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 AUNIPQ9H7T9 357 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 ETV7Q9Y603 341 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 STAB2Q8WWQ8 2551 aa7.32□□□□□ -1.24
MSH5-218ENST00000494646 DPPA5A6NC42 116 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 IGHV3-23P01764 117 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 HLA-AP01891 365 aaKnown RBP7.31□□□□□ -1.24
MSH5-218ENST00000494646 RPS19P39019 145 aaKnown RBP7.31□□□□□ -1.24
MSH5-218ENST00000494646 RPL27AP46776 148 aaKnown RBP7.31□□□□□ -1.24
MSH5-218ENST00000494646 EXOSC2Q13868 293 aaKnown RBP7.31□□□□□ -1.24
MSH5-218ENST00000494646 MZT2BQ6NZ67 158 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 ZNF66Q6ZN08 573 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 SPAG16Q8N0X2 631 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 OR4S2Q8NH73 311 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 TMEM167AQ8TBQ9 72 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 S100A16Q96FQ6 103 aaKnown RBP7.31□□□□□ -1.24
MSH5-218ENST00000494646 SLC5A7Q9GZV3 580 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 SELENOKQ9Y6D0 94 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 S4R3C0 116 aa7.31□□□□□ -1.24
MSH5-218ENST00000494646 TRBV9A0A0B4J1U6 114 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 TRAV3A0A0B4J244 114 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 TEX22C9J3V5 150 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 PPP5D1E7EU14 171 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 H0Y980 276 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 J3KRW8 73 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 BMPR1BO00238 502 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 SULT1C2O00338 296 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 AIREO43918 545 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 CREBL2O60519 120 aaPredicted RBP7.3□□□□□ -1.24
MSH5-218ENST00000494646 KBTBD11O94819 623 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 NDUFB8O95169 186 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 OR2C1O95371 312 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 HRASP01112 189 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 PPYP01298 95 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 REG1AP05451 166 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 RPA2P15927 270 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 EDN2P20800 178 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 KCTD21Q4G0X4 260 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 SGPP2Q8IWX5 399 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 PUSL1Q8N0Z8 303 aaKnown RBP7.3□□□□□ -1.24
MSH5-218ENST00000494646 OR13F1Q8NGS4 319 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 VSTM2AQ8TAG5 236 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 ZMAT4Q9H898 229 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 FBXL7Q9UJT9 491 aa7.3□□□□□ -1.24
MSH5-218ENST00000494646 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.29□□□□□ -1.24
MSH5-218ENST00000494646 A0A0A6YYH2 397 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 A0A1B0GW64 132 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 A6NJ64 397 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 FAM223BA6NKX1 122 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 J3QL48 77 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 XRCC3O43542 346 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 PMP2P02689 132 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 AREGP15514 252 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 CBX5P45973 191 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 RFX2P48378 723 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 SCAND1P57086 179 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 C15orf32Q32M92 178 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 OR4A47Q6IF82 309 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 ZNF818PQ6ZRF7 136 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 SLC25A42Q86VD7 318 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 TMEM17Q86X19 198 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 FAM223AQ8IWN6 122 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 NECAP1Q8NC96 275 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 ZBTB34Q8NCN2 500 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 TSPAN14Q8NG11 270 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 OR5AP2Q8NGF4 316 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 GIMAP1Q8WWP7 306 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 YIPF6Q96EC8 236 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 FANCD2OSQ96PS1 177 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 HRASLSQ9HDD0 168 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 IFT46Q9NQC8 304 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 SLC2A9Q9NRM0 540 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 PEMTQ9UBM1 199 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 DMRT1Q9Y5R6 373 aa7.29□□□□□ -1.24
MSH5-218ENST00000494646 A0A087WXM4 84 aa7.28□□□□□ -1.24
MSH5-218ENST00000494646 CGB1A6NKQ9 187 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms