RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 OR4S2Q8NH73 311 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 FAM222BQ8WU58 562 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 RHOVQ96L33 236 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 GAFA1Q96PS6 74 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 MANBALQ9NQG1 85 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 TCF19Q9Y242 345 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 A0A1W2PPV4 95 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 IRF2P14316 349 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 MYOD1P15172 320 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 KIR2DS2P43631 304 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 RND2P52198 227 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 UBE2G2P60604 165 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 RPL23P62829 140 aaKnown RBP9.23□□□□□ -0.93
CHMP3-209ENST00000494623 BSXQ3C1V8 233 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 PDLIM3Q53GG5 364 aaPredicted RBP9.23□□□□□ -0.93
CHMP3-209ENST00000494623 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 SPNS3Q6ZMD2 512 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 CYP2G1PQ6ZSU1 146 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 OR5T1Q8NG75 326 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 TCEAL7Q9BRU2 100 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 HINT2Q9BX68 163 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 MS4A5Q9H3V2 200 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 TMEM250H0YL14 139 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 CLEC12BQ2HXU8 276 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
CHMP3-209ENST00000494623 C16orf82Q7Z2V1 217 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 CISD2Q8N5K1 135 aaKnown RBP9.22□□□□□ -0.93
CHMP3-209ENST00000494623 ZNF383Q8NA42 475 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 TMEM170AQ8WVE7 144 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 CTDSP1Q9GZU7 261 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 RAB9BQ9NP90 201 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 GVINP1Q7Z2Y8 2422 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 C11orf94C9JXX5 98 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 NDUFB7P17568 137 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 CST9LP1Q5W188 147 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 OR4A47Q6IF82 309 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 TCF23Q7RTU1 214 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 DOLPP1Q86YN1 238 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 PRSS33Q8NF86 280 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 FAM216AQ8WUB2 273 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 ABHD17AQ96GS6 310 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 ZNF251Q9BRH9 671 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 IDI2-AS1Q9NZ38 188 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 ZNRD1Q9P1U0 126 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 GAB2Q9UQC2 676 aa9.22□□□□□ -0.93
CHMP3-209ENST00000494623 A0A0G2JNJ9 132 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 TMPRSS2O15393 492 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 LY86O95711 162 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 OPN1MWP04001 364 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 TRGC1P0CF51 173 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 OPN1MW2P0DN77 364 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 OPN1MW3P0DN78 364 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 THBS3P49746 956 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 MIC13Q5XKP0 118 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 ZNF788Q6ZQV5 615 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 ABHD5Q8WTS1 349 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 FRZBQ92765 325 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 NEIL1Q96FI4 390 aaPredicted RBP9.21□□□□□ -0.93
CHMP3-209ENST00000494623 MGST2Q99735 147 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 NCOR1P1Q9H4R4 102 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 Q9UFV3 132 aa9.21□□□□□ -0.93
CHMP3-209ENST00000494623 C16orf97H3BN30 126 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 MKRN2OSH3BPM6 223 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 PRRG2O14669 202 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 ITGB1BP1O14713 200 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 NPPCP23582 126 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 CCKARP32238 428 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 CDX1P47902 265 aaPredicted RBP9.21□□□□□ -0.94
CHMP3-209ENST00000494623 TMEM108Q6UXF1 575 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 OR51G1Q8NGK1 321 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 DIRC2Q96SL1 478 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 ENY2Q9NPA8 101 aa9.21□□□□□ -0.94
CHMP3-209ENST00000494623 ROS1P08922 2347 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 YLPM1P49750 1951 aaKnown RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 IFITM10A6NMD0 228 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 C15orf61A6NNL5 157 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 NDUFS6O75380 124 aaKnown RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 OPRK1P41145 380 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 NUBP1P53384 320 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 HSPE1P61604 102 aaKnown RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 PXMP4Q9Y6I8 212 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 TET2Q6N021 2002 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 SPTBN2O15020 2390 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 DPRXA6NFQ7 191 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 SEC14L6B5MCN3 397 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 PRSS46E5RG02 174 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 H7BYZ3 331 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms