RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RNF150Q9ULK6 438 aa9.31□□□□□ -0.92
CSNK1E-212ENST00000494610 SLC31A2O15432 143 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 IFNA21P01568 189 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 GAPDHP04406 335 aaKnown RBP9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 OR5AC1P0C628 307 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 UCP1P25874 307 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 DUTP33316 252 aaKnown RBP9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 BCAP31P51572 246 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 ZNF134P52741 427 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 EGFEM1PQ0D2K5 195 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 ZNF816Q0VGE8 651 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 KHDC1LQ5JSQ8 128 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 TGIF2LXQ8IUE1 241 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 OR8H3Q8N146 312 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 OR4P4Q8NGL7 312 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 DPM3Q9P2X0 92 aa9.3□□□□□ -0.92
CSNK1E-212ENST00000494610 hCG_2014768A0A024R1R8 64 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 A0A0B4J293 547 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 A0A1W2PPE3 182 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 TNFSF12O43508 249 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 IGLV2-14P01704 120 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 IGHV3-7P01780 117 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 MC5RP33032 325 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 ERVK-16P61578 105 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 SUPT4H1P63272 117 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 EIF4EBP1Q13541 118 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 TMEM187Q14656 261 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 ZNF695Q8IW36 515 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 MRPL41Q8IXM3 137 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 LINC00482Q8N8I6 264 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 CHAC2Q8WUX2 184 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 RBPMSQ93062 196 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 MALSU1Q96EH3 234 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 SPIN2AQ99865 258 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 SPIN2BQ9BPZ2 258 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 COMMD9Q9P000 198 aa9.29□□□□□ -0.92
CSNK1E-212ENST00000494610 HMX3A6NHT5 357 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 AMY1AP04745 511 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 RPL39P5Q59GN2 51 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 TPTE2P1Q5T6R2 138 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 FAM219AQ8IW50 185 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 OR52B4Q8NGK2 314 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 RNASE11Q8TAA1 199 aaKnown RBP9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 ST6GALNAC6Q969X2 333 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 RCC1LQ96I51 464 aaKnown RBP9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 TMEM56Q96MV1 263 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 ASCL2Q99929 193 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 CACFD1Q9UGQ2 172 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 TSSC4Q9Y5U2 329 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 TMEM56-RWDD3S4R434 201 aa9.28□□□□□ -0.92
CSNK1E-212ENST00000494610 CDS2O95674 445 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 HPRT1P00492 218 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 AKR1C2P52895 323 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 CYCSP99999 105 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 UTF1Q5T230 341 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 THOC7Q6I9Y2 204 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 FAM53AQ6NSI3 398 aaPredicted RBP9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 AKAP14Q86UN6 197 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 SPAG16Q8N0X2 631 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 CADM3Q8N126 398 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 UXS1Q8NBZ7 420 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 OR5M8Q8NGP6 311 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 RRNAD1Q96FB5 475 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 C5orf30Q96GV9 206 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 TP53RKQ96S44 253 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 ZNF251Q9BRH9 671 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 PLEKHA2Q9HB19 425 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 SLC35D1Q9NTN3 355 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 PITPNC1Q9UKF7 332 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 WASHC3Q9Y3C0 194 aa9.27□□□□□ -0.93
CSNK1E-212ENST00000494610 FCGR3BO75015 233 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 HRASP01112 189 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 SNRNP70P08621 437 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 SULT1A3P0DMM9 295 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 SULT1A4P0DMN0 295 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 HLA-GP17693 338 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 VDAC1P21796 283 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 C9orf152Q5JTZ5 239 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 TMEM268Q5VZI3 342 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 GSG1LQ6UXU4 331 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 ZNF329Q86UD4 541 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 OR5AN1Q8NGI8 311 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 OSR1Q8TAX0 266 aaPredicted RBP9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 DDB2Q92466 427 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 NABP2Q9BQ15 211 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 PDCD10Q9BUL8 212 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 MRPL20Q9BYC9 149 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 ZFP57Q9NU63 452 aa9.26□□□□□ -0.93
CSNK1E-212ENST00000494610 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
CSNK1E-212ENST00000494610 A0A1B0GVG6 124 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms