RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TNFSF18Q9UNG2 199 aa1.62□□□□□ -2.15
PTPN12-212ENST00000494248 CELA1Q9UNI1 258 aa1.62□□□□□ -2.15
PTPN12-212ENST00000494248 TECPR2O15040 1411 aa1.62□□□□□ -2.15
PTPN12-212ENST00000494248 CEP162Q5TB80 1403 aa1.62□□□□□ -2.15
PTPN12-212ENST00000494248 HECW2Q9P2P5 1572 aa1.62□□□□□ -2.15
PTPN12-212ENST00000494248 DENND4AQ7Z401 1863 aa1.62□□□□□ -2.15
PTPN12-212ENST00000494248 DNMT1P26358 1616 aaKnown RBP1.62□□□□□ -2.15
PTPN12-212ENST00000494248 WDR62O43379 1518 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TMEM2Q9UHN6 1383 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 DISP2A7MBM2 1401 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 NAIPQ13075 1403 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FMN1Q68DA7 1419 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 PRG4Q92954 1404 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 IGKV1-27A0A075B6S5 117 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TRAV30A0A087WSZ9 112 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CCL15-CCL14A0A0B4J2E2 113 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 IGHV3-16A0A0C4DH30 117 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TRDV1A0A1B0GX56 115 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 EPOPA6NHQ4 379 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 IFITM5A6NNB3 132 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 A8MWP6 167 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 M0R1X1 148 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 DNASE2O00115 360 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 LGALS9O00182 355 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 PEX7O00628 323 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CCL25O15444 150 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 GSTZ1O43708 216 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FSTL3O95633 263 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 NCR2O95944 276 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 APODP05090 189 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FABP3P05413 133 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 GPX1P07203 203 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 P0DMU3 169 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FAM231AP0DMU4 169 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FAM231CP0DMU5 169 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CSRP1P21291 193 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 COX7A1P24310 79 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 IL3RAP26951 378 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 POLR2IP36954 125 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 OPRK1P41145 380 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 INPP1P49441 399 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 GNG4P50150 75 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 COPZ1P61923 177 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 RPS11P62280 158 aaKnown RBP eCLIP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 RPL23P62829 140 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CRADDP78560 199 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CDK6Q00534 326 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 SLC38A11Q08AI6 406 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 PSG7Q13046 419 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 EIF3IQ13347 325 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 RBMY1FQ15415 496 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 PRR30Q53SZ7 412 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 LRRC10Q5BKY1 277 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CASC10Q5T4H9 136 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 LYRM7Q5U5X0 104 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FKBP1CQ5VVH2 108 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 AMMECR1LQ6DCA0 310 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 HRCT1Q6UXD1 115 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 Q6ZS49 121 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 RFLNAQ6ZTI6 216 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TMUB2Q71RG4 321 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 PRNTQ86SH4 94 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 LINC00596Q86U02 117 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF695Q8IW36 515 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TMEM61Q8N0U2 210 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 DRAM1Q8N682 238 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 OR11G2Q8NGC1 345 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 OR5A2Q8NGI9 324 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 OR10D4PQ8NGN7 298 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 ZNF519Q8TB69 540 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 SLC25A40Q8TBP6 338 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 LMX1AQ8TE12 382 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TWIST2Q8WVJ9 160 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 DERL3Q96Q80 235 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TRIB3Q96RU7 358 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 HSD17B10Q99714 261 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 SLC25A21Q9BQT8 299 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 NKX6-2Q9C056 277 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 POLR2J2Q9GZM3 115 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 POLR2J3Q9H1A7 115 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 GTSF1LQ9H1H1 148 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 MED28Q9H204 178 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 LINC00597Q9H2U6 94 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 RNF122Q9H9V4 155 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 OR5AC2Q9NZP5 309 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 TAAR3PQ9P1P4 343 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 RPUSD1Q9UJJ7 312 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 SCP2D1Q9UJQ7 156 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 CYSLTR1Q9Y271 337 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 AMMECR1Q9Y4X0 333 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 FLVCR1Q9Y5Y0 555 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 F11RQ9Y624 299 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 ABCC10Q5T3U5 1492 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 NEO1Q92859 1461 aa1.61□□□□□ -2.15
PTPN12-212ENST00000494248 VIRMAQ69YN4 1812 aaKnown RBP1.61□□□□□ -2.15
PTPN12-212ENST00000494248 BRCA1P38398 1863 aaKnown RBP1.6□□□□□ -2.15
PTPN12-212ENST00000494248 ATRNO75882 1429 aa1.6□□□□□ -2.15
PTPN12-212ENST00000494248 ARHGAP31Q2M1Z3 1444 aa1.6□□□□□ -2.15
PTPN12-212ENST00000494248 YLPM1P49750 1951 aaKnown RBP1.6□□□□□ -2.15
PTPN12-212ENST00000494248 IGLV4-3A0A075B6K6 122 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms