RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SCOCQ9UIL1 159 aa11.34□□□□□ -0.59
ATG4B-224ENST00000494132 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 C13orf42A0A1B0GVH6 325 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 M0QYG6 137 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 CTDSP2O14595 271 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 OVOL1O14753 267 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 RGS5O15539 181 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 S1PR2O95136 353 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 HRASP01112 189 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 TSPAN5P62079 268 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 MSMO1Q15800 293 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 OR4A47Q6IF82 309 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 LAX1Q8IWV1 398 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.6
ATG4B-224ENST00000494132 OR6F1Q8NGZ6 308 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 OR52I2Q8NH67 350 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 TMEM167AQ8TBQ9 72 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 TMEM68Q96MH6 324 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 PRR25Q96S07 402 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-224ENST00000494132 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 HRASLSQ9HDD0 168 aa11.33□□□□□ -0.6
ATG4B-224ENST00000494132 A0A1B0GW64 132 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 H3BUA1 57 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 CREBL2O60519 120 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-224ENST00000494132 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 HSPB1P04792 205 aaKnown RBP11.32□□□□□ -0.6
ATG4B-224ENST00000494132 RCVRNP35243 200 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 ECI1P42126 302 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
ATG4B-224ENST00000494132 DGCR2P98153 550 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 ZNF45Q02386 682 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 PHLDA2Q53GA4 152 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 ABHD1Q96SE0 405 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 KLK11Q9UBX7 282 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 ADAM30Q9UKF2 790 aa11.32□□□□□ -0.6
ATG4B-224ENST00000494132 TEX22C9J3V5 150 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 SAP30O75446 220 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 PGLYRP1O75594 196 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-224ENST00000494132 HPRT1P00492 218 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 IL6RP08887 468 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-224ENST00000494132 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
ATG4B-224ENST00000494132 HAPLN4Q86UW8 402 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 RAB2BQ8WUD1 216 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
ATG4B-224ENST00000494132 A0A0G2JLM5 398 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 GPR31O00270 319 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 RBFOX2O43251 390 aaKnown RBP eCLIP11.3□□□□□ -0.65e-6■■□□□ 12.1
ATG4B-224ENST00000494132 OR2J3O76001 311 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 REG1AP05451 166 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 AREGP15514 252 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 NQO2P16083 231 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 LPAR6P43657 344 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 RPL5P46777 297 aaKnown RBP11.3□□□□□ -0.6
ATG4B-224ENST00000494132 TAS2R31P59538 309 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 RHOGP84095 191 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 DYNC2LI1Q8TCX1 351 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 BET1LQ9NYM9 111 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 S4R3C0 116 aa11.3□□□□□ -0.6
ATG4B-224ENST00000494132 DPPA5A6NC42 116 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 CGB1A6NKQ9 187 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 H3BMQ9 156 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 LY86O95711 162 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 CD3DP04234 171 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 HLA-GP17693 338 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 F2RP25116 425 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 TMBIM6P55061 237 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 CMTM1Q8IZ96 169 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 TTC9CQ8N5M4 171 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 OR4D10Q8NGI6 311 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 FCAMRQ8WWV6 532 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 BORCS5Q969J3 196 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
ATG4B-224ENST00000494132 DGCR14Q96DF8 476 aaKnown RBP11.29□□□□□ -0.6
ATG4B-224ENST00000494132 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-224ENST00000494132 UPK2O00526 184 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 NOL3O60936 208 aaKnown RBP11.28□□□□□ -0.6
ATG4B-224ENST00000494132 IGHV3-23P01764 117 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 PI3P19957 117 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 MAS1LP35410 378 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 G6PCP35575 357 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 EXOSC2Q13868 293 aaKnown RBP11.28□□□□□ -0.6
ATG4B-224ENST00000494132 ZNF585BQ52M93 769 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 VAX1Q5SQQ9 334 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 ZNF343Q6P1L6 599 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 TBC1D26Q86UD7 250 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 C6orf62Q9GZU0 229 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-224ENST00000494132 PLEKHA2Q9HB19 425 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 CCDC59Q9P031 241 aaKnown RBP11.28□□□□□ -0.6
ATG4B-224ENST00000494132 PEF1Q9UBV8 284 aaKnown RBP11.28□□□□□ -0.6
ATG4B-224ENST00000494132 MTFP1Q9UDX5 166 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 NSG2Q9Y328 171 aa11.28□□□□□ -0.6
ATG4B-224ENST00000494132 MARCH11A6NNE9 402 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms