RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF385CQ66K41 422 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-207ENST00000494090 GATAD1Q8WUU5 269 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 DCTN5Q9BTE1 182 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 TMEM70Q9BUB7 260 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 CARHSP1Q9Y2V2 147 aaKnown RBP16.28■□□□□ 0.2
COL27A1-207ENST00000494090 HERPUD1Q15011 391 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-207ENST00000494090 EAF1Q96JC9 268 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-207ENST00000494090 PARLQ9H300 379 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 OR4C46A6NHA9 309 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 SNRPCP09234 159 aaKnown RBP16.28■□□□□ 0.2
COL27A1-207ENST00000494090 IGFBP3P17936 291 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-207ENST00000494090 PMCHL1Q16048 86 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 ATP1A1-AS1Q5TC04 95 aa16.28■□□□□ 0.2
COL27A1-207ENST00000494090 C2orf68Q2NKX9 166 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 PAPPA-AS1Q5QFB9 102 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 PLAUP00749 431 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 DUX5Q96PT3 197 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 XIRP1Q702N8 1843 aaKnown RBP16.27■□□□□ 0.2
COL27A1-207ENST00000494090 CA7P43166 264 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 ZNF362Q5T0B9 420 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-207ENST00000494090 TCF24Q7RTU0 167 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 ERASQ7Z444 233 aa16.27■□□□□ 0.2
COL27A1-207ENST00000494090 CENPVQ7Z7K6 275 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-207ENST00000494090 RTBDNQ9BSG5 229 aaPredicted RBP16.27■□□□□ 0.19
COL27A1-207ENST00000494090 PLSCR2Q9NRY7 297 aa16.27■□□□□ 0.19
COL27A1-207ENST00000494090 TMEM250H0YL14 139 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 TMEM177Q53S58 311 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 ABLIM2Q6H8Q1 611 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 OSR1Q8TAX0 266 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-207ENST00000494090 FAM181BA6NEQ2 426 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 ADIPOQQ15848 244 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 MSGN1A6NI15 193 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 A8MXK9 166 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 NMUP48645 174 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 RTN4RL2Q86UN3 420 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 TMEM106BQ9NUM4 274 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-207ENST00000494090 EIF3GO75821 320 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL27A1-207ENST00000494090 GPX1P07203 203 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 EFNB1P98172 346 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 SAPCD1Q5SSQ6 148 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 PATJQ8NI35 1801 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 CABIN1Q9Y6J0 2220 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 PIKFYVEQ9Y2I7 2098 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 LY6EQ16553 131 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 NR2C2APQ86WQ0 139 aa16.26■□□□□ 0.19
COL27A1-207ENST00000494090 ZNF256Q9Y2P7 627 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-207ENST00000494090 SPATA45Q537H7 98 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 C2orf83Q53S99 150 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 MRPS18CQ9Y3D5 142 aaKnown RBP16.25■□□□□ 0.19
COL27A1-207ENST00000494090 RFPL3SP0C7P2 107 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 COTL1Q14019 142 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 GDF9O60383 454 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 GPR61Q9BZJ8 451 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 TRBV9A0A0B4J1U6 114 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 CA2P00918 260 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 CRYBB3P26998 211 aa16.25■□□□□ 0.19
COL27A1-207ENST00000494090 A0A1B0GTI1 187 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 BTCP35070 178 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 FAM90A1Q86YD7 464 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 PF4P02776 101 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 FAM57AQ8TBR7 257 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 DPM3Q9P2X0 92 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 DOCK3Q8IZD9 2030 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 PSME4Q14997 1843 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 IGHV3OR16-12A0A075B7B8 117 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 NUDT3O95989 172 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 UCP1P25874 307 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 VWCEQ96DN2 955 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 NABP2Q9BQ15 211 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 VENTXO95231 258 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 CIRBPQ14011 172 aaKnown RBP16.24■□□□□ 0.19
COL27A1-207ENST00000494090 LEAP2Q969E1 77 aa16.24■□□□□ 0.19
COL27A1-207ENST00000494090 ZIC3O60481 467 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 SFRP2Q96HF1 295 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 RPRMQ9NS64 109 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 A0A0G2JLM5 398 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 NUTF2P61970 127 aaKnown RBP16.23■□□□□ 0.19
COL27A1-207ENST00000494090 GGACTQ9BVM4 153 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 C1QTNF5Q9BXJ0 243 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 RNF222A6NCQ9 220 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 H3BVH4 76 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 LYPD3O95274 346 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 DDTP30046 118 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 MEF2CQ06413 473 aaPredicted RBP16.23■□□□□ 0.19
COL27A1-207ENST00000494090 ACP7Q6ZNF0 438 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 GCHFRP30047 84 aa16.23■□□□□ 0.19
COL27A1-207ENST00000494090 MRPS16Q9Y3D3 137 aaKnown RBP16.23■□□□□ 0.19
COL27A1-207ENST00000494090 VKORC1L1Q8N0U8 176 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 RCC1LQ96I51 464 aaKnown RBP16.22■□□□□ 0.19
COL27A1-207ENST00000494090 CGB1A6NKQ9 187 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 J3QRE1 110 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 LEPROTL1O95214 131 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 SRSF12Q8WXF0 261 aaKnown RBP16.22■□□□□ 0.19
COL27A1-207ENST00000494090 PGLYRP4Q96LB8 373 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 GPR82Q96P67 336 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 SPTA1P02549 2419 aa16.22■□□□□ 0.19
COL27A1-207ENST00000494090 TRAV14DV4A0A0A6YYC5 116 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms