RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 LDLRAD3Q86YD5 345 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 CASTOR1Q8WTX7 329 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 LINC00574Q9H8X3 128 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 RETNQ9HD89 108 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 DNAJC4Q9NNZ3 241 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 TMED3Q9Y3Q3 217 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 IGKV1-6A0A0C4DH72 117 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 C1orf196B1AJZ1 125 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 C12orf77C9JDV5 145 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 RNASEK-C17orf49H0YIS7 233 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 NDUFB3O43676 98 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 YPEL1O60688 119 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 DFFBO76075 338 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 HBZP02008 142 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 RAB7AP51149 207 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 SUPT4H1P63272 117 aaKnown RBP5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 LRRC10Q5BKY1 277 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 LIAT1Q6ZQX7 453 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 HAPLN4Q86UW8 402 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 CBLN2Q8IUK8 224 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 ARL11Q969Q4 196 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 TIMD4Q96H15 378 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 C2orf50Q96LR7 162 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 YPEL2Q96QA6 119 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 SPIN2AQ99865 258 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 SPIN2BQ9BPZ2 258 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 PCGF1Q9BSM1 259 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 NDUFAF3Q9BU61 184 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 PPDPFQ9H3Y8 114 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 PIPOXQ9P0Z9 390 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 RBM7Q9Y580 266 aaKnown RBP5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 MGAQ8IWI9 3026 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 DMXL2Q8TDJ6 3036 aa5.54□□□□□ -1.52
FNDC3B-212ENST00000494000 IGHV3-64DA0A0J9YX35 117 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 C3orf85A0A1B0GTC6 90 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 F5H768 121 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 M0QZK8 103 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 OR8U9P0C7N5 309 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 SLC25A4P12235 298 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 GNRHRP30968 328 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 CATR1Q13166 79 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 TMEM187Q14656 261 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 C11orf71Q6IPW1 123 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 OR10X1Q8NGY0 326 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 SECTM1Q8WVN6 248 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 IL1F10Q8WWZ1 152 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PTH2Q96A98 100 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 ABHD14BQ96IU4 210 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 LINC00312Q9Y6C7 94 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 J3QLI3 93 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 SIAH2O43255 324 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PLAUP00749 431 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 FOLR2P14207 255 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 GLIPR1P48060 266 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 ELLP55199 621 aaPredicted RBP5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PKIAP61925 76 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PRR20EP86478 221 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PRR20CP86479 221 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PRR20DP86480 221 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PRR20BP86481 221 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PRR20AP86496 221 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 GUCA2BQ16661 112 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 TMEM155Q4W5P6 130 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 GCSAMLQ5JQS6 135 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF66Q6ZN08 573 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF645Q8N7E2 425 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 HSD17B11Q8NBQ5 300 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 THAP6Q8TBB0 222 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 CCL17Q92583 94 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 TMEM222Q9H0R3 208 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 LIME1Q9H400 295 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 PLEKHF2Q9H8W4 249 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 UFC1Q9Y3C8 167 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 DYSFO75923 2080 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 CFAP47Q6ZTR5 3102 aa5.53□□□□□ -1.52
FNDC3B-212ENST00000494000 IGF2RP11717 2491 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 IGHV3OR15-7A0A075B7D8 119 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 KBTBD11-OT1A0A1B0GTJ5 212 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 LOC102723971A0A1B0GUV8 181 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 C15orf65H3BRN8 121 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 CCL24O00175 119 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 PPIHO43447 177 aaKnown RBP5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 TOX4O94842 621 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 CDS2O95674 445 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 GYPAP02724 150 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 CGB3P0DN86 165 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 CGB7P0DN87 165 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 SLC25A6P12236 298 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 HIST1H1BP16401 226 aaKnown RBP5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 EDDM3BP56851 147 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 H2BFSP57053 126 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 RPL15P61313 204 aaKnown RBP5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 EDDM3AQ14507 147 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 CLINT1Q14677 625 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 CDSNQ15517 529 aa5.52□□□□□ -1.53
FNDC3B-212ENST00000494000 SPRNQ5BIV9 151 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms