RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FUT3P21217 361 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 HRH1P35367 487 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 RPS27P42677 84 aaKnown RBP6.76□□□□□ -1.33
HDAC6-234ENST00000493923 FHITP49789 147 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
HDAC6-234ENST00000493923 RND3P61587 244 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 PAX2Q02962 417 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM95Q3KNT9 176 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 KRTAP27-1Q3LI81 207 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM41BQ5BJD5 291 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 ACTL10Q5JWF8 245 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 OR10S1Q8NGN2 331 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 OR5H2Q8NGV7 314 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 OR6K6Q8NGW6 343 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 OR4K13Q8NH42 304 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 OR5B3Q8NH48 314 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 FAM216AQ8WUB2 273 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 MRGPRFQ96AM1 343 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 DUX5Q96PT3 197 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 OR2V2Q96R30 315 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 NMNAT3Q96T66 252 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 PATZ1Q9HBE1 687 aaKnown RBP6.76□□□□□ -1.33
HDAC6-234ENST00000493923 GCM1Q9NP62 436 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 PNRC2Q9NPJ4 139 aaKnown RBP6.76□□□□□ -1.33
HDAC6-234ENST00000493923 SLC2A9Q9NRM0 540 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 MRPL22Q9NWU5 206 aaKnown RBP6.76□□□□□ -1.33
HDAC6-234ENST00000493923 BET1LQ9NYM9 111 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 GSKIPQ9P0R6 139 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 MRM2Q9UI43 246 aaKnown RBP6.76□□□□□ -1.33
HDAC6-234ENST00000493923 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 PPIAL4AQ9Y536 164 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 PIGBOS1A0A0B4J2F0 54 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM89A2RUT3 159 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM178BH3BS89 294 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 KCNAB3O43448 404 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 PITX3O75364 302 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 FCN3O75636 299 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 HRASP01112 189 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 GYPBP06028 91 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 OR5G3P0C626 314 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 IGFBP3P17936 291 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-234ENST00000493923 EGR1P18146 543 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 PPP1CCP36873 323 aaKnown RBP6.75□□□□□ -1.33
HDAC6-234ENST00000493923 RPL23AP62750 156 aaKnown RBP6.75□□□□□ -1.33
HDAC6-234ENST00000493923 SLC9A3R2Q15599 337 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 SLC18B1Q6NT16 456 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 LYPD2Q6UXB3 125 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 C12orf54Q6X4T0 127 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM182Q6ZP80 229 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-234ENST00000493923 COLCA1Q6ZS62 124 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 MOGAT3Q86VF5 341 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 PNKDQ8N490 385 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 SIGLECL1Q8N7X8 197 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 CYB561D1Q8N8Q1 229 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 NPEPL1Q8NDH3 523 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 BHLHE23Q8NDY6 225 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM230Q96A57 120 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TIMD4Q96H15 378 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 OR10C1Q96KK4 312 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TTTY10Q9BZA0 68 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 C5orf66Q9H5L9 145 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 SDF2L1Q9HCN8 221 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 NAT8Q9UHE5 227 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 AK3Q9UIJ7 227 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 FUT9Q9Y231 359 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 ST3GAL6Q9Y274 331 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 COX11Q9Y6N1 276 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 TGP01266 2768 aa6.75□□□□□ -1.33
HDAC6-234ENST00000493923 MDFIC2A0A1B0GVS7 189 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 ZNF732B4DXR9 585 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 H7BYZ3 331 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 J3QLI3 93 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 RENP00797 406 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 PFN1P07737 140 aaKnown RBP6.74□□□□□ -1.33
HDAC6-234ENST00000493923 WNT2P09544 360 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 IGHV4-38-2P0DP08 117 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 MMP9P14780 707 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 HSD11B1P28845 292 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 GNRHRP30968 328 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 OTX1P32242 354 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-234ENST00000493923 GUCA1AP43080 201 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-234ENST00000493923 COMPP49747 757 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-234ENST00000493923 BAXQ07812 192 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 ZNF154Q13106 437 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 GNMTQ14749 295 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 ANKRD55Q3KP44 614 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 FBLN7Q53RD9 439 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 PRAMEF6Q5VXH4 476 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 KCTD18Q6PI47 426 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-234ENST00000493923 SPSB3Q6PJ21 355 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 TOMM20LQ6UXN7 152 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 TCF24Q7RTU0 167 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 CENPVQ7Z7K6 275 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-234ENST00000493923 LHFPL1Q86WI0 220 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 CHST4Q8NCG5 386 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 OR5L1Q8NGL2 311 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 OR2G3Q8NGZ4 309 aa6.74□□□□□ -1.33
HDAC6-234ENST00000493923 ZNF418Q8TF45 676 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms