RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DEFB108AA8MXU0 73 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 SYNGR2O43760 224 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 RAMP3O60896 148 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 ADH4P08319 380 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 HTD2P86397 168 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 CATR1Q13166 79 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 MSMO1Q15800 293 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 ZNF726P1Q15940 193 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
VCP-207ENST00000493886 UBE2L5PA0A1B0GUS4 154 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 HSPB1P04792 205 aaKnown RBP11.43□□□□□ -0.58
VCP-207ENST00000493886 BTNL3Q6UXE8 466 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 ZNRF1Q8ND25 227 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 SNRNP40Q96DI7 357 aaKnown RBP11.43□□□□□ -0.58
VCP-207ENST00000493886 ZNF835Q9Y2P0 537 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 IGHV1-46P01743 117 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 TNFAIP6P98066 277 aaPredicted RBP11.43□□□□□ -0.58
VCP-207ENST00000493886 SLAQ13239 276 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 LTC4SQ16873 150 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 PRR30Q53SZ7 412 aaPredicted RBP11.43□□□□□ -0.58
VCP-207ENST00000493886 FAM201AQ5SY85 155 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 NUP37Q8NFH4 326 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 PSG11Q9UQ72 335 aa11.43□□□□□ -0.58
VCP-207ENST00000493886 LOC102723971A0A1B0GUV8 181 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 CEBPZOSA8MTT3 80 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 DFFBO76075 338 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 FABP4P15090 132 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 ZNF816Q0VGE8 651 aaPredicted RBP11.42□□□□□ -0.58
VCP-207ENST00000493886 WFDC8Q8IUA0 241 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 RBMXL1Q96E39 390 aaKnown RBP11.42□□□□□ -0.58
VCP-207ENST00000493886 NOL4LQ96MY1 436 aaPredicted RBP11.42□□□□□ -0.58
VCP-207ENST00000493886 IL19Q9UHD0 177 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 LOC102724200A0A096LPH7 203 aaPredicted RBP11.42□□□□□ -0.58
VCP-207ENST00000493886 C17orf98A8MV24 154 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 M0QZ24 198 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 CLDN1O95832 211 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 AGMATQ9BSE5 352 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 GCM1Q9NP62 436 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 RNF7Q9UBF6 113 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 DMXL2Q8TDJ6 3036 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BKO60814 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 KRASP01116 189 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HBE1P02100 147 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BJP06899 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 DEFA4P12838 97 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BOP23527 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BBP33778 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 EDDM3BP56851 147 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BDP58876 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 BRWD1-AS2P59051 145 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BCP62807 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 BATFQ16520 125 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST2H2BEQ16778 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 CR1LQ2VPA4 569 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 SPINK9Q5DT21 86 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.42□□□□□ -0.58
VCP-207ENST00000493886 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BHQ93079 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BNQ99877 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 HIST1H2BMQ99879 126 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
VCP-207ENST00000493886 PIEZO2Q9H5I5 2752 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 S1PR2O95136 353 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 BCL2P10415 239 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 G6PCP35575 357 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 ATMQ13315 3056 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 ZNF66Q6ZN08 573 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 ZNF525Q8N782 197 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 FAM222BQ8WU58 562 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 LPAR2Q9HBW0 351 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 JKAMPQ9P055 326 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 GNG12Q9UBI6 72 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 BSNQ9UPA5 3926 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 DSCAMO60469 2012 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 CD55P08174 381 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 TNFSF4P23510 183 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 PTTG1IPP53801 180 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 SHISA2Q6UWI4 295 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 TCTEX1D1Q8N7M0 179 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 NECAP1Q8NC96 275 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 OR4C12Q96R67 309 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 JPT1Q9UK76 154 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 DCHS1Q96JQ0 3298 aa11.41□□□□□ -0.58
VCP-207ENST00000493886 DPRXA6NFQ7 191 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 LINC00473A8K010 186 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 FAM90A26D6RGX4 464 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 P0C879 139 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 IRF2P14316 349 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 LINC00205P59089 165 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 MORN2Q502X0 79 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 SP5Q6BEB4 398 aaPredicted RBP11.4□□□□□ -0.58
VCP-207ENST00000493886 C1QL4Q86Z23 238 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 HSD17B10Q99714 261 aaKnown RBP11.4□□□□□ -0.58
VCP-207ENST00000493886 RBKSQ9H477 322 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 MSRB2Q9Y3D2 182 aa11.4□□□□□ -0.58
VCP-207ENST00000493886 PCNX1Q96RV3 2341 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms