RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 EIF4EBP1Q13541 118 aaPredicted RBP12.58□□□□□ -0.4
PTPRU-208ENST00000493601 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 PUSL1Q8N0Z8 303 aaKnown RBP12.58□□□□□ -0.4
PTPRU-208ENST00000493601 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 NEURL2Q9BR09 285 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 PLEKHA3Q9HB20 300 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 RHBDL2Q9NX52 303 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 TAS2R8Q9NYW2 309 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 SSR3Q9UNL2 185 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.4
PTPRU-208ENST00000493601 CEPT1Q9Y6K0 416 aa12.58□□□□□ -0.4
PTPRU-208ENST00000493601 PPP5D1E7EU14 171 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 SSX5O60225 188 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 HRASP01112 189 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 ZNF735P0CB33 412 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 KIR2DS2P43631 304 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 SCAND1P57086 179 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 ARPC4P59998 168 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 ADAMTSL5Q6ZMM2 481 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 FYTTD1Q96QD9 318 aaKnown RBP12.57□□□□□ -0.4
PTPRU-208ENST00000493601 SLC2A9Q9NRM0 540 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 TECRQ9NZ01 308 aaKnown RBP12.57□□□□□ -0.4
PTPRU-208ENST00000493601 FBXL7Q9UJT9 491 aa12.57□□□□□ -0.4
PTPRU-208ENST00000493601 SACSQ9NZJ4 4579 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 LGALS9O00182 355 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 IL6RP08887 468 aaPredicted RBP12.56□□□□□ -0.4
PTPRU-208ENST00000493601 FOLR2P14207 255 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 MSMO1Q15800 293 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 ZC4H2Q9NQZ6 224 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 ETV7Q9Y603 341 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
PTPRU-208ENST00000493601 HLA-AP01891 365 aaKnown RBP12.55□□□□□ -0.4
PTPRU-208ENST00000493601 ARL3P36405 182 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 BRWD1-AS2P59051 145 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 RPL8P62917 257 aaKnown RBP12.55□□□□□ -0.4
PTPRU-208ENST00000493601 GUCA2BQ16661 112 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 DEFB114Q30KQ6 69 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 BEST4Q8NFU0 473 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 OR4A5Q8NH83 315 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 LYSTQ99698 3801 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 HIPK2Q9H2X6 1198 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 Q9H521 79 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 GAR1Q9NY12 217 aaKnown RBP12.55□□□□□ -0.4
PTPRU-208ENST00000493601 DMRT1Q9Y5R6 373 aa12.55□□□□□ -0.4
PTPRU-208ENST00000493601 A0A1B0GW64 132 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 ZNF785A8K8V0 405 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 OR2C1O95371 312 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 CRYGCP07315 174 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 AREGP15514 252 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 HIST1H1BP16401 226 aaKnown RBP12.54□□□□□ -0.4
PTPRU-208ENST00000493601 HLA-GP17693 338 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 PSMB6P28072 239 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 SDC2P34741 201 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 LINC00322Q6ZN03 302 aaPredicted RBP12.54□□□□□ -0.4
PTPRU-208ENST00000493601 C19orf35Q6ZS72 473 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 SSX9Q7RTT3 188 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 SLC25A38Q96DW6 304 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 RETNQ9HD89 108 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
PTPRU-208ENST00000493601 A0A0A6YYH2 397 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 A6NJ64 397 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 OR11H12B2RN74 326 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 E7EUB6 86 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 RBFOX2O43251 390 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPRU-208ENST00000493601 TNFSF12O43508 249 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 IGHV3-23P01764 117 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 CD7P09564 240 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 DEFA4P12838 97 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 CTRB1P17538 263 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 FCGR2CP31995 323 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 MXD1Q05195 221 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 CATR1Q13166 79 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 TIMM50Q3ZCQ8 353 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 CLEC19AQ6UXS0 136 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 DEFB125Q8N687 156 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 FANCD2OSQ96PS1 177 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 GPHA2Q96T91 129 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 YTHDF1Q9BYJ9 559 aaKnown RBP12.53□□□□□ -0.4
PTPRU-208ENST00000493601 SRD5A3Q9H8P0 318 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 HRASLSQ9HDD0 168 aa12.53□□□□□ -0.4
PTPRU-208ENST00000493601 TRAV18A0A075B6X5 111 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 TRBV7-1A0A0A6YYK4 115 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 A8MWP6 167 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 NDUFB8O95169 186 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 PPYP01298 95 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 EDN2P20800 178 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms