RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SYT13Q7L8C5 426 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 CORO2AQ92828 525 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 CHODLQ9H9P2 273 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 SEPSECSQ9HD40 501 aaKnown RBP9.76□□□□□ -0.85
HDAC4-210ENST00000493582 RNF212BA8MTL3 300 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 NGFP01138 241 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 MT-ND6P03923 174 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 RIPPLY3P57055 190 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 TMEM249Q2WGJ8 235 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 PDLIM3Q53GG5 364 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-210ENST00000493582 WDR73Q6P4I2 378 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 MRPL21Q7Z2W9 205 aaKnown RBP9.76□□□□□ -0.85
HDAC4-210ENST00000493582 ZNF784Q8NCA9 323 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-210ENST00000493582 GP6Q9HCN6 339 aa9.76□□□□□ -0.85
HDAC4-210ENST00000493582 A0A096LPE4 126 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 A0A1W2PPZ6 126 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 C5orf49A4QMS7 147 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 C10orf142B7Z368 130 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 DKK1O94907 266 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 NUDT3O95989 172 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 CA1P00915 261 aaPredicted RBP9.75□□□□□ -0.85
HDAC4-210ENST00000493582 P0C879 139 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 HYAL1Q12794 435 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 LRRC10Q5BKY1 277 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 PQLC2Q6ZP29 291 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 KIR3DL3Q8N743 410 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 IFI44Q8TCB0 444 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 AKIRIN1Q9H9L7 192 aaPredicted RBP9.75□□□□□ -0.85
HDAC4-210ENST00000493582 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 FAM186AA6NE01 2351 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 IGHV3-64DA0A0J9YX35 117 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 REG1AP05451 166 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 PCBD1P61457 104 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 SLAQ13239 276 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 PRR31Q5SQ13 230 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 PRR27Q6MZM9 219 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 H2BFWTQ7Z2G1 175 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 C5orf30Q96GV9 206 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 TXNDC17Q9BRA2 123 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 NPIPB11E5RHQ5 1161 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 H0YJW9 148 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 HSBP1O75506 76 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 CELA3BP08861 270 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 GCHFRP30047 84 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 CENPWQ5EE01 88 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 SPATA46Q5T0L3 261 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 C18orf32Q8TCD1 76 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 MGST2Q99735 147 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 PRDM14Q9GZV8 571 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 SERTAD4Q9NUC0 356 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 KIAA1549Q9HCM3 1950 aa9.75□□□□□ -0.85
HDAC4-210ENST00000493582 DOCK7Q96N67 2140 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 IGLV3-12A0A075B6K2 115 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 GAGE12BA1L429 117 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 FAM181BA6NEQ2 426 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 NEURL1O76050 574 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 APCSP02743 223 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 GNG4P50150 75 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 Q6ZS52 159 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 OR4P4Q8NGL7 312 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 PRRG4Q9BZD6 226 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 HES4Q9HCC6 221 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 MUC21A0A0G2JKD1 596 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 MUC21A0A140T8X8 626 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 HELTA6NFD8 242 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 M0R2Z0 102 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 DUX1O43812 170 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 LIFP15018 202 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 CRYBB3P26998 211 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 CA7P43166 264 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 SELENOVP59797 346 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 MUC21Q5SSG8 566 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 COLCA1Q6ZS62 124 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 YRDCQ86U90 279 aaKnown RBP9.74□□□□□ -0.85
HDAC4-210ENST00000493582 CRISPLD2Q9H0B8 497 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 MMP17Q9ULZ9 603 aa9.74□□□□□ -0.85
HDAC4-210ENST00000493582 TRGV10A0A0A0MS01 117 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 ZNF716A6NP11 495 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 C9JCJ5 164 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 LMO7DNF2Z398 122 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 CXCL13O43927 109 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 CGAP01215 116 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 RHOBP62745 196 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 MEGF9Q9H1U4 602 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 MS4A5Q9H3V2 200 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 NCOR1P1Q9H4R4 102 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 TECRQ9NZ01 308 aaKnown RBP9.73□□□□□ -0.85
HDAC4-210ENST00000493582 MRPL27Q9P0M9 148 aaKnown RBP9.73□□□□□ -0.85
HDAC4-210ENST00000493582 SAP30O75446 220 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 AMY1AP04745 511 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 SSTR5P35346 364 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 DSCR4P56555 118 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-210ENST00000493582 GGTLC1Q9BX51 225 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 PROK2Q9HC23 129 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 CLEC5AQ9NY25 188 aa9.73□□□□□ -0.85
HDAC4-210ENST00000493582 GATA2P23769 480 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-210ENST00000493582 OPRK1P41145 380 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms