RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 FCGR2CP31995 323 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 NAA10P41227 235 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-213ENST00000492506 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
HDAC3-213ENST00000492506 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 DNM1P34Q6PK57 102 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 WDR82Q6UXN9 313 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 THNSL2Q86YJ6 484 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 OR4S1Q8NGB4 309 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 PIFOQ8TCI5 191 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 LRRC29Q8WV35 223 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 TMEM106AQ96A25 262 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF799Q96GE5 643 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF2Q9BSG1 426 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-213ENST00000492506 URM1Q9BTM9 101 aaKnown RBP10.62□□□□□ -0.71
HDAC3-213ENST00000492506 MEGF9Q9H1U4 602 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 SERTAD4Q9NUC0 356 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 MRPL22Q9NWU5 206 aaKnown RBP10.62□□□□□ -0.71
HDAC3-213ENST00000492506 FBXL17Q9UF56 701 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 ZFP30Q9Y2G7 519 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 NSG2Q9Y328 171 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 PUS1Q9Y606 427 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC3-213ENST00000492506 NDUFB3O43676 98 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 AMBPP02760 352 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 PRH1P02810 166 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 TRGC2P03986 189 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 MAS1P04201 325 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
HDAC3-213ENST00000492506 RPP30P78346 268 aaKnown RBP10.61□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 C1orf100Q5SVJ3 147 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 NCR3LG1Q68D85 454 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 STUMQ69YW2 141 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF679Q8IYX0 411 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 CYB561A3Q8NBI2 242 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 WFDC9Q8NEX5 89 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 OR56B2PQ8NGI1 322 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 TSEN15Q8WW01 171 aaKnown RBP10.61□□□□□ -0.71
HDAC3-213ENST00000492506 NMNAT3Q96T66 252 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 C20orf24Q9BUV8 137 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 RIMS4Q9H426 269 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-213ENST00000492506 METTL8Q9H825 291 aaKnown RBP10.61□□□□□ -0.71
HDAC3-213ENST00000492506 GPR173Q9NS66 373 aa10.61□□□□□ -0.71
HDAC3-213ENST00000492506 FAM230AA0A1W2PPH8 454 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 M0R1W7 72 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 DEDDO75618 318 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 GSTP1P09211 210 aaKnown RBP10.6□□□□□ -0.71
HDAC3-213ENST00000492506 TMEM225BP0DP42 221 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 AKR1C4P17516 323 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 PAX5Q02548 391 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 MZT1Q08AG7 82 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 RAB32Q13637 225 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 LEMD1Q68G75 181 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 SSX7Q7RTT5 188 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 TRAPPC6BQ86SZ2 158 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 NDUFA11Q86Y39 141 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 OR51A2Q8NGJ7 313 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 FRZBQ92765 325 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 EMG1Q92979 244 aaKnown RBP10.6□□□□□ -0.71
HDAC3-213ENST00000492506 SPTSSAQ969W0 71 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 IMMP2LQ96T52 175 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 FAM234AQ9H0X4 552 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 GPR132Q9UNW8 380 aa10.6□□□□□ -0.71
HDAC3-213ENST00000492506 TRAV8-7A0A075B6U6 113 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 MEIS3P1A6NDR6 274 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF705GA8MUZ8 300 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 K7N7A8 449 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 PPBPP02775 128 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 TFF1P04155 84 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 CXCL1P09341 107 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 IGLL1P15814 213 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 HIST1H1CP16403 213 aaKnown RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 TMEM11P17152 192 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 RPS27P42677 84 aaKnown RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 SOX2P48431 317 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 S100A10P60903 97 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 HLA-DRB3P79483 266 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 MFGE8Q08431 387 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF266Q14584 549 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF260Q3ZCT1 412 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 LRRC10Q5BKY1 277 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ARSJQ5FYB0 599 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF788Q6ZQV5 615 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 DPY19L4Q7Z388 723 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF429Q86V71 674 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 Q8N2B8 174 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 OR4K13Q8NH42 304 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 ORAOV1Q8WV07 137 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 H1FXQ92522 213 aaKnown RBP10.59□□□□□ -0.71
HDAC3-213ENST00000492506 SPSB4Q96A44 273 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 OR4F4Q96R69 305 aa10.59□□□□□ -0.71
HDAC3-213ENST00000492506 CITED2Q99967 270 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms