RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 DYRK1AQ13627 763 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 AADACL3Q5VUY0 350 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 ACSM6Q6P461 480 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 MZT2AQ6P582 158 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 ZNF818PQ6ZRF7 136 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 SSX9Q7RTT3 188 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 ANKRD13BQ86YJ7 626 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 PUSL1Q8N0Z8 303 aaKnown RBP11.62□□□□□ -0.55
USP39-217ENST00000491659 ZNF2Q9BSG1 426 aaPredicted RBP11.62□□□□□ -0.55
USP39-217ENST00000491659 SCPEP1Q9HB40 452 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 ANKRD34BA5PLL1 514 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 FAM223BA6NKX1 122 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 HPGDSO60760 199 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 NAT1P18440 290 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
USP39-217ENST00000491659 RFX2P48378 723 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 CTF1Q16619 201 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 CNPY1Q3B7I2 92 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 SLC25A42Q86VD7 318 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 FAM223AQ8IWN6 122 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 OR6Q1Q8NGQ2 317 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 OR51H1Q8NH63 302 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 MOB3AQ96BX8 217 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
USP39-217ENST00000491659 OR4C12Q96R67 309 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 B9D2Q9BPU9 175 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
USP39-217ENST00000491659 NAA50Q9GZZ1 169 aaKnown RBP11.61□□□□□ -0.55
USP39-217ENST00000491659 PEF1Q9UBV8 284 aaKnown RBP11.61□□□□□ -0.55
USP39-217ENST00000491659 FAM25AB3EWG3 89 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 FAM25CB3EWG5 89 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 FAM25GB3EWG6 89 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 ZNF701M0R085 212 aaPredicted RBP11.6□□□□□ -0.55
USP39-217ENST00000491659 HPRT1P00492 218 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 ELK1P19419 428 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 HLA-DMAP28067 261 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 HRH1P35367 487 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 TAS2R31P59538 309 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 RPL8P62917 257 aaKnown RBP11.6□□□□□ -0.55
USP39-217ENST00000491659 RHOGP84095 191 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 OR4A47Q6IF82 309 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 ZNF343Q6P1L6 599 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 DHRS11Q6UWP2 260 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 SNX29P2Q8IUI4 249 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 OR4A5Q8NH83 315 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 CD300LFQ8TDQ1 290 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 GPX8Q8TED1 209 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 HRASLSQ9HDD0 168 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 BET1LQ9NYM9 111 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 RSL24D1Q9UHA3 163 aaKnown RBP11.6□□□□□ -0.55
USP39-217ENST00000491659 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
USP39-217ENST00000491659 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 PRH1P02810 166 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 RLN1P04808 185 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 NQO2P16083 231 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 ZNF182P17025 639 aaPredicted RBP11.59□□□□□ -0.55
USP39-217ENST00000491659 GNRHRP30968 328 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 RCVRNP35243 200 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 TSPAN5P62079 268 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 EXOSC2Q13868 293 aaKnown RBP11.59□□□□□ -0.55
USP39-217ENST00000491659 CMTM1Q8IZ96 169 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 DMBX1Q8NFW5 382 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 OR6F1Q8NGZ6 308 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 RSRP1Q9BUV0 290 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 FXYD6Q9H0Q3 95 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 AKIP1Q9NQ31 210 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 COMMD9Q9P000 198 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 ADAM30Q9UKF2 790 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 CEPT1Q9Y6K0 416 aa11.59□□□□□ -0.55
USP39-217ENST00000491659 NPIPB5A8MRT5 1133 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 TEX22C9J3V5 150 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 ZNF735P0CB33 412 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 HLA-GP17693 338 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 ERVK-16P61578 105 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 ZNF45Q02386 682 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 ATP5G2Q06055 141 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 POU2AF1Q16633 256 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 RPEL1Q2QD12 228 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 CLVS1Q8IUQ0 354 aaPredicted RBP11.58□□□□□ -0.56
USP39-217ENST00000491659 NECAP1Q8NC96 275 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 PLEKHA2Q9HB19 425 aa11.58□□□□□ -0.56
USP39-217ENST00000491659 LSM4Q9Y4Z0 139 aaKnown RBP11.58□□□□□ -0.56
USP39-217ENST00000491659 TRBV9A0A0B4J1U6 114 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 GPR31O00270 319 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
USP39-217ENST00000491659 OR2J3O76001 311 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 S1PR2O95136 353 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 DHFRP00374 187 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 IL6RP08887 468 aaPredicted RBP11.57□□□□□ -0.56
USP39-217ENST00000491659 S100GP29377 79 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 TATDN3Q17R31 274 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 FAM209BQ5JX69 171 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 LYSMD2Q8IV50 215 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 OR9G4Q8NGQ1 327 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
USP39-217ENST00000491659 SLC2A9Q9NRM0 540 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 TMEM140Q9NV12 185 aa11.57□□□□□ -0.56
USP39-217ENST00000491659 PTTG2Q9NZH5 202 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms