RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 TUBA4BQ9H853 241 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 PLEKHA3Q9HB20 300 aa10.34□□□□□ -0.75
COL6A3-211ENST00000491233 DPPA5A6NC42 116 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 AIREO43918 545 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 ATP6V1G2O95670 118 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
COL6A3-211ENST00000491233 PTHLHP12272 177 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 EDN2P20800 178 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 MECP2P51608 486 aaKnown RBP10.33□□□□□ -0.76
COL6A3-211ENST00000491233 BRWD1-AS2P59051 145 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 ARPC4P59998 168 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 CD81P60033 236 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 CD300EQ496F6 205 aaPredicted RBP10.33□□□□□ -0.76
COL6A3-211ENST00000491233 ZNF66Q6ZN08 573 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 MFSD4AQ8N468 514 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 OR13F1Q8NGS4 319 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 SECTM1Q8WVN6 248 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 Q9H521 79 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 RNF167Q9H6Y7 350 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 GAR1Q9NY12 217 aaKnown RBP10.33□□□□□ -0.76
COL6A3-211ENST00000491233 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 SACSQ9NZJ4 4579 aa10.33□□□□□ -0.76
COL6A3-211ENST00000491233 TRAV18A0A075B6X5 111 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 LOC100506127A0A0U1RQW1 187 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 A0A1B0GW64 132 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 NPIPB5A8MRT5 1133 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 E7EUB6 86 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 TNFSF12O43508 249 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 HLA-AP01891 365 aaKnown RBP10.32□□□□□ -0.76
COL6A3-211ENST00000491233 ZNF735P0CB33 412 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 MYOD1P15172 320 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 AREGP15514 252 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 MAS1LP35410 378 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 ZNF773Q6PK81 442 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 SSX9Q7RTT3 188 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 GVQW1Q8N7I0 195 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
COL6A3-211ENST00000491233 RETNQ9HD89 108 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 CCL28Q9NRJ3 127 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 DMRT1Q9Y5R6 373 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 ETV7Q9Y603 341 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 S4R3C0 116 aa10.32□□□□□ -0.76
COL6A3-211ENST00000491233 LCE6AA0A183 80 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 GGCTO75223 188 aaKnown RBP10.31□□□□□ -0.76
COL6A3-211ENST00000491233 TPPPO94811 219 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 NDUFB8O95169 186 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 HRASP01112 189 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 PPYP01298 95 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 IGHV3-23P01764 117 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 FCER2P06734 321 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 FCGR2CP31995 323 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 KIR2DS2P43631 304 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 SCAND1P57086 179 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 TIMM50Q3ZCQ8 353 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 IDNKQ5T6J7 187 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 LAX1Q8IWV1 398 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 CCDC140Q96MF4 163 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 FANCD2OSQ96PS1 177 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 NEURL2Q9BR09 285 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 YTHDF1Q9BYJ9 559 aaKnown RBP10.31□□□□□ -0.76
COL6A3-211ENST00000491233 SLC2A9Q9NRM0 540 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 SLC2A8Q9NY64 477 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 CEPT1Q9Y6K0 416 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 STARD9Q9P2P6 4700 aa10.31□□□□□ -0.76
COL6A3-211ENST00000491233 TENM2Q9NT68 2774 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 OR2C1O95371 312 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 IFNA6P05013 189 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 REG1AP05451 166 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 CD7P09564 240 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 FOLR2P14207 255 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 HLA-GP17693 338 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 PSMB6P28072 239 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 ARL3P36405 182 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 FXYD4P59646 89 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 RPL8P62917 257 aaKnown RBP10.3□□□□□ -0.76
COL6A3-211ENST00000491233 MSMO1Q15800 293 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 CLEC19AQ6UXS0 136 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 HOGA1Q86XE5 327 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 SPAG16Q8N0X2 631 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 SLC5A7Q9GZV3 580 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 WFDC10AQ9H1F0 79 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 BET1LQ9NYM9 111 aa10.3□□□□□ -0.76
COL6A3-211ENST00000491233 A0A0A6YYH2 397 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 A6NJ64 397 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 CGB1A6NKQ9 187 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 ZNF785A8K8V0 405 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 LGALS9O00182 355 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 DHFRP00374 187 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 CRYGCP07315 174 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 CTRB1P17538 263 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 CATR1Q13166 79 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 NEDD8Q15843 81 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 GUCA2BQ16661 112 aa10.29□□□□□ -0.76
COL6A3-211ENST00000491233 CTRB2Q6GPI1 263 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms