RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 EXOSC2Q13868 293 aaKnown RBP13.71□□□□□ -0.21
HMGN1-219ENST00000491183 C19orf35Q6ZS72 473 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 SSX9Q7RTT3 188 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 ZBTB34Q8NCN2 500 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 VSTM2AQ8TAG5 236 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 GIMAP1Q8WWP7 306 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 S100A16Q96FQ6 103 aaKnown RBP13.71□□□□□ -0.21
HMGN1-219ENST00000491183 SLC5A7Q9GZV3 580 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
HMGN1-219ENST00000491183 TENM3Q9P273 2699 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 OR2J3O76001 311 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 HRASP01112 189 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 ZNF735P0CB33 412 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 KIR2DS2P43631 304 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 FXYD4P59646 89 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 RPEL1Q2QD12 228 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 UBE2NLQ5JXB2 153 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 SLC25A42Q86VD7 318 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 SPAG16Q8N0X2 631 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 FYTTD1Q96QD9 318 aaKnown RBP13.7□□□□□ -0.22
HMGN1-219ENST00000491183 SLC2A9Q9NRM0 540 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 SIGLEC8Q9NYZ4 499 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
HMGN1-219ENST00000491183 HUWE1Q7Z6Z7 4374 aaKnown RBP13.7□□□□□ -0.22
HMGN1-219ENST00000491183 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.69□□□□□ -0.22
HMGN1-219ENST00000491183 CGB1A6NKQ9 187 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 SULT1C2O00338 296 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 MAS1LP35410 378 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 MECP2P51608 486 aaKnown RBP13.69□□□□□ -0.22
HMGN1-219ENST00000491183 ZNF818PQ6ZRF7 136 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 SAMD12Q8N8I0 201 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 ANAPC10Q9UM13 185 aa13.69□□□□□ -0.22
HMGN1-219ENST00000491183 RBFOX2O43251 390 aaKnown RBP eCLIP13.68□□□□□ -0.221e-18■□□□□ 8.3
HMGN1-219ENST00000491183 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 CRYGCP07315 174 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 IGHV4-30-4P0DP06 118 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 AREGP15514 252 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 RFX2P48378 723 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 TAS2R20P59543 309 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 RPL8P62917 257 aaKnown RBP13.68□□□□□ -0.22
HMGN1-219ENST00000491183 C15orf32Q32M92 178 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 OR4A47Q6IF82 309 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 ADAMTSL5Q6ZMM2 481 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 C19orf73Q9NVV2 129 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 BET1LQ9NYM9 111 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
HMGN1-219ENST00000491183 TRAV3A0A0B4J244 114 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 IZUMO1RA6ND01 250 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 H0Y980 276 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 NDUFB8O95169 186 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 HLA-GP17693 338 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 GNRHRP30968 328 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 KLK9Q2XQG4 91 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 TMEM69Q5SWH9 247 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 RCHY1Q96PM5 261 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-219ENST00000491183 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 EHFQ9NZC4 300 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 KLK9Q9UKQ9 250 aa13.67□□□□□ -0.22
HMGN1-219ENST00000491183 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 A8MZ25 164 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 PPP5D1E7EU14 171 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 HPRT1P00492 218 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 PMP2P02689 132 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 CTRB1P17538 263 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 NAT1P18440 290 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 PSMB6P28072 239 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 CATR1Q13166 79 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 POU2AF1Q16633 256 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 CTRB2Q6GPI1 263 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 OR51H1Q8NH63 302 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 OR4A5Q8NH83 315 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 SLC25A46Q96AG3 418 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 AIFM2Q9BRQ8 373 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 HRASLSQ9HDD0 168 aa13.66□□□□□ -0.22
HMGN1-219ENST00000491183 UPK2O00526 184 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 IGHV3-23P01764 117 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
HMGN1-219ENST00000491183 REG1AP05451 166 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 EIF4EP06730 217 aaKnown RBP13.65□□□□□ -0.22
HMGN1-219ENST00000491183 TAS2R31P59538 309 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 OR2B8PP59922 312 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 NCS1P62166 190 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 ZNF2Q9BSG1 426 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-219ENST00000491183 FUNDC2Q9BWH2 189 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 PEMTQ9UBM1 199 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 S4R3C0 116 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 NBEAL2Q6ZNJ1 2754 aa13.65□□□□□ -0.22
HMGN1-219ENST00000491183 STAB2Q8WWQ8 2551 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 PGLYRP1O75594 196 aaPredicted RBP13.64□□□□□ -0.23
HMGN1-219ENST00000491183 S1PR2O95136 353 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 OR2C1O95371 312 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms